RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 SCYL3Q8IZE3 742 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 MYCT1Q8N699 235 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 SDR42E1Q8WUS8 393 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 FMO2Q99518 471 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.11■□□□□ 0.01
ITGB4-202ENST00000449880 ZMYND12Q9H0C1 365 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 SPC25Q9HBM1 224 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 ATP8A2Q9NTI2 1148 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 PCDHB13Q9Y5F0 798 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 DIP2AQ14689 1571 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 SOS2Q07890 1332 aaPredicted RBP15.11■□□□□ 0.01
ITGB4-202ENST00000449880 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 USP17L21D6R901 530 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 CHURC1Q8WUH1 139 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 FRMPD1Q5SYB0 1578 aa15.11■□□□□ 0.01
ITGB4-202ENST00000449880 NLRP14Q86W24 1093 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 EIF2AQ9BY44 585 aaKnown RBP15.1■□□□□ 0.01
ITGB4-202ENST00000449880 CXorf56Q9H5V9 222 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 ECEL1O95672 775 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 SCG2P13521 617 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 SEMA3FQ13275 785 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 PANK4Q9NVE7 773 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 PLAAQ9Y263 795 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 ATP8A1Q9Y2Q0 1164 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 EPHA10Q5JZY3 1008 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 SRPRBQ9Y5M8 271 aaKnown RBP15.1■□□□□ 0.01
ITGB4-202ENST00000449880 ATP10DQ9P241 1426 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.1■□□□□ 0.01
ITGB4-202ENST00000449880 GARSP41250 739 aaKnown RBP15.1■□□□□ 0.01
ITGB4-202ENST00000449880 USP14P54578 494 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 NR1H3Q13133 447 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 NLRX1Q86UT6 975 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 SLFN12Q8IYM2 578 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 MAGOHBQ96A72 148 aaKnown RBP15.1■□□□□ 0.01
ITGB4-202ENST00000449880 AS3MTQ9HBK9 375 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 PFDN4Q9NQP4 134 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 SCINQ9Y6U3 715 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 RASSF10A6NK89 507 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 ZMYND10O75800 440 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 CYP2E1P05181 493 aaPredicted RBP15.1■□□□□ 0.01
ITGB4-202ENST00000449880 ADD1P35611 737 aaKnown RBP15.1■□□□□ 0.01
ITGB4-202ENST00000449880 BAG6P46379 1132 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 PDCLQ13371 301 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 HADHQ16836 314 aaKnown RBP15.1■□□□□ 0.01
ITGB4-202ENST00000449880 CAPRIN2Q6IMN6 1127 aaKnown RBP15.1■□□□□ 0.01
ITGB4-202ENST00000449880 ALDH8A1Q9H2A2 487 aaPredicted RBP15.1■□□□□ 0.01
ITGB4-202ENST00000449880 TMEM60Q9H2L4 133 aa15.1■□□□□ 0.01
ITGB4-202ENST00000449880 USP32Q8NFA0 1604 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 CFBP00751 764 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 CHGBP05060 677 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 P4HA1P13674 534 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 GOLGA8FQ08AF8 430 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 GOLGA8DPQ0D2H9 430 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 SF3A3Q12874 501 aaKnown RBP eCLIP15.09■□□□□ 0.015e-7■■■■■ 76.4
ITGB4-202ENST00000449880 NECTIN1Q15223 517 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.09■□□□□ 0.01
ITGB4-202ENST00000449880 EFHD1Q9BUP0 239 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 SUFUQ9UMX1 484 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 USTQ9Y2C2 406 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 BTBD18B2RXH4 712 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 RFX1P22670 979 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 ADD2P35612 726 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 RESP18Q5W5W9 173 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 GPBP1Q86WP2 473 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 PROCA1Q8NCQ7 364 aaPredicted RBP15.09■□□□□ 0.01
ITGB4-202ENST00000449880 FLAD1Q8NFF5 587 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 FAM81BQ96LP2 452 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 STK17AQ9UEE5 414 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 PACSIN2Q9UNF0 486 aaPredicted RBP15.09■□□□□ 0.01
ITGB4-202ENST00000449880 KRT3P12035 628 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 EXOC3L4Q17RC7 722 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.09■□□□□ 0.01
ITGB4-202ENST00000449880 OTUD6AQ7L8S5 288 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 TEX9Q8N6V9 391 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 SMCR8Q8TEV9 937 aaPredicted RBP15.09■□□□□ 0.01
ITGB4-202ENST00000449880 hCG_1642624A0A1W2PR95 340 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 MOCS3O95396 460 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 ABCB4P21439 1286 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 PRR16Q569H4 304 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 NEK8Q86SG6 692 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 TBC1D1Q86TI0 1168 aaPredicted RBP15.09■□□□□ 0.01
ITGB4-202ENST00000449880 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
ITGB4-202ENST00000449880 DDX39AO00148 427 aaKnown RBP15.08■□□□□ 0.01
ITGB4-202ENST00000449880 CD19P15391 556 aa15.08■□□□□ 0.01
ITGB4-202ENST00000449880 TCP11X2Q5H9J9 407 aa15.08■□□□□ 0.01
ITGB4-202ENST00000449880 FAM26FQ5R3K3 315 aa15.08■□□□□ 0.01
ITGB4-202ENST00000449880 CTAGE3PQ8IX95 158 aa15.08■□□□□ 0.01
ITGB4-202ENST00000449880 GEMIN8Q9NWZ8 242 aaKnown RBP15.08■□□□□ 0.01
ITGB4-202ENST00000449880 CSADQ9Y600 493 aa15.08■□□□□ 0.01
ITGB4-202ENST00000449880 GNPTABQ3T906 1256 aa15.08■□□□□ 0
ITGB4-202ENST00000449880 TOGARAM2Q6ZUX3 1019 aa15.08■□□□□ 0
ITGB4-202ENST00000449880 MB21D1Q8N884 522 aa15.08■□□□□ 0
ITGB4-202ENST00000449880 COG1Q8WTW3 980 aa15.08■□□□□ 0
ITGB4-202ENST00000449880 MEFVO15553 781 aaPredicted RBP15.08■□□□□ 0
ITGB4-202ENST00000449880 ZBTB24O43167 697 aaPredicted RBP15.08■□□□□ 0
ITGB4-202ENST00000449880 PPP2R2AP63151 447 aa15.08■□□□□ 0
ITGB4-202ENST00000449880 PTGDRQ13258 359 aa15.08■□□□□ 0
ITGB4-202ENST00000449880 ZNF579Q8NAF0 562 aaKnown RBP15.08■□□□□ 0
ITGB4-202ENST00000449880 THRAP3Q9Y2W1 955 aaKnown RBP15.08■□□□□ 0
ITGB4-202ENST00000449880 RFX7Q2KHR2 1363 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms