RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 KLRC1P26715 233 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 MESDQ14696 234 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 SETDB1Q15047 1291 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 PPP2R5BQ15173 497 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 GNPTABQ3T906 1256 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 KAT2BQ92831 832 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 KCND1Q9NSA2 647 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 TMEM260Q9NX78 707 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 MROH5Q6ZUA9 1318 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 PCDH11XQ9BZA7 1347 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 PCDH11YQ9BZA8 1340 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 PGRMC1O00264 195 aaKnown RBP13.56□□□□□ -0.24
UBE3B-204ENST00000449510 XRCC5P13010 732 aaKnown RBP13.56□□□□□ -0.24
UBE3B-204ENST00000449510 CTNNA2P26232 953 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 SLC8A1P32418 973 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 SLC16A2P36021 539 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 MXRA7P84157 204 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 BIRC2Q13490 618 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 CDKAL1Q5VV42 579 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 ZNF449Q6P9G9 518 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 PNMA2Q9UL42 364 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 ZNF652Q9Y2D9 606 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 TARSL2A2RTX5 802 aaKnown RBP13.56□□□□□ -0.24
UBE3B-204ENST00000449510 HMGB1P1B2RPK0 211 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-204ENST00000449510 SART1O43290 800 aaKnown RBP13.56□□□□□ -0.24
UBE3B-204ENST00000449510 ACTN1P12814 892 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 PRDX5P30044 214 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 USH1GQ495M9 461 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 MYCBPAPQ8TBZ2 947 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 CYFIP2Q96F07 1278 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 NLRP3Q96P20 1036 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 PIGSQ96S52 555 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 FMO2Q99518 471 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 TRIM51Q9BSJ1 452 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 GEMIN8Q9NWZ8 242 aaKnown RBP13.56□□□□□ -0.24
UBE3B-204ENST00000449510 DAAM1Q9Y4D1 1078 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 ADGRL3Q9HAR2 1447 aa13.56□□□□□ -0.24
UBE3B-204ENST00000449510 SARSP49591 514 aaKnown RBP13.55□□□□□ -0.24
UBE3B-204ENST00000449510 FKBP3Q00688 224 aaKnown RBP13.55□□□□□ -0.24
UBE3B-204ENST00000449510 UBE2SQ16763 222 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 KRT25Q7Z3Z0 450 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 SPATS2Q86XZ4 545 aaKnown RBP13.55□□□□□ -0.24
UBE3B-204ENST00000449510 DDX12PQ92771 950 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 TTI1O43156 1089 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 HIP1RO75146 1068 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 FAM13AO94988 1023 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 STAT1P42224 750 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 EXOC3L4Q17RC7 722 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 HP1BP3Q5SSJ5 553 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-204ENST00000449510 STAG1Q8WVM7 1258 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 LRRC27Q9C0I9 530 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 ANKARQ7Z5J8 1434 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 MTMR3Q13615 1198 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 PACSIN1Q9BY11 444 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 INTUQ9ULD6 942 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 USTQ9Y2C2 406 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 L3MBTL1Q9Y468 752 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 CTDP1Q9Y5B0 961 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-204ENST00000449510 UTYO14607 1347 aa13.55□□□□□ -0.24
UBE3B-204ENST00000449510 RIMBP2O15034 1052 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 SRGNP10124 158 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 KRT15P19012 456 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 PAX7P23759 505 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 PTGISQ16647 500 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 IFT74Q96LB3 600 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 GPR101Q96P66 508 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-204ENST00000449510 SH2D4AQ9H788 454 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 REXO2Q9Y3B8 237 aaKnown RBP13.54□□□□□ -0.24
UBE3B-204ENST00000449510 DIAPH2O60879 1101 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 EPB41P11171 864 aaKnown RBP13.54□□□□□ -0.24
UBE3B-204ENST00000449510 HS2ST1Q7LGA3 356 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 WHAMMQ8TF30 809 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 MTMR8Q96EF0 704 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 MAP3K15Q6ZN16 1313 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 WTIPA6NIX2 430 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-204ENST00000449510 DDX39AO00148 427 aaKnown RBP13.54□□□□□ -0.24
UBE3B-204ENST00000449510 PPP2R2AP63151 447 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 CETN1Q12798 172 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 EYA3Q99504 573 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 TRIM9Q9C026 710 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 ARHGAP20Q9P2F6 1191 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 COL4A3BPQ9Y5P4 624 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 HEG1Q9ULI3 1381 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 KIAA1210Q9ULL0 1709 aa13.54□□□□□ -0.24
UBE3B-204ENST00000449510 WDR91A4D1P6 747 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 SMIM24O75264 130 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 TTMPQ5BVD1 217 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 SEL1L2Q5TEA6 688 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 SEC16BQ96JE7 1060 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 PHF20Q9BVI0 1012 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 FAM53CQ9NYF3 392 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 STK36Q9NRP7 1315 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 PRPF6O94906 941 aaKnown RBP13.53□□□□□ -0.24
UBE3B-204ENST00000449510 CASKIN2Q8WXE0 1202 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 TAF1DQ9H5J8 278 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-204ENST00000449510 AZI2Q9H6S1 392 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 BTG4Q9NY30 223 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms