RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 H7C1D1 291 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 B4GALNT2Q8NHY0 566 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 USP17L12C9JPN9 530 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 USP17L21D6R901 530 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 IL1R1P14778 569 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 TROAPQ12815 778 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 GNPTABQ3T906 1256 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 CABP5Q9NP86 173 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 RWDD2AQ9UIY3 292 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 RGPD3A6NKT7 1758 aaPredicted RBP14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 RGPD4Q7Z3J3 1758 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 CALML3P27482 149 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 AFMP43652 599 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 NT5C2P49902 561 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 FXR1P51114 621 aaKnown RBP eCLIP14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 ERVK-24P63145 666 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 PPP1R7Q15435 360 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 L3MBTL1Q9Y468 752 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 TNS1Q9HBL0 1735 aaKnown RBP14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 GTPBP6O43824 516 aaPredicted RBP14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 MYL1P05976 194 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 EPHB4P54760 987 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 PKN1Q16512 942 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 FKBP15Q5T1M5 1219 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 TSC22D3Q99576 134 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 RGL1Q9NZL6 768 aa14.82□□□□□ -0.04
SYNGAP1-204ENST00000449372 SETSIPP0DME0 302 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 PPP4CP60510 307 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 MDM2Q00987 491 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 SPA17Q15506 151 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 PAPD7Q5XG87 772 aaKnown RBP14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 CRELD2Q6UXH1 353 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 HDAC7Q8WUI4 952 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 ADD3Q9UEY8 706 aaKnown RBP14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 TRIM37O94972 964 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 KRT9P35527 623 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 HHATQ5VTY9 493 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 RETREG2Q8NC44 543 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 ZNF570Q96NI8 536 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 PSMA7O14818 248 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 ZNF185O15231 689 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 TOB1P50616 345 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 ROR2Q01974 943 aaKnown RBP14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 SPATA21Q7Z572 469 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 STK11IPQ8N1F8 1099 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 WDR66Q8TBY9 1149 aa14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 DMGDHQ9UI17 866 aaKnown RBP14.81□□□□□ -0.04
SYNGAP1-204ENST00000449372 SPDYE3A6NKU9 549 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 FGFR1OPO95684 399 aaKnown RBP14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 LINGO3P0C6S8 592 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 FERP16591 822 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 USP4Q13107 963 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 EMBQ6PCB8 327 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 TAX1BP1Q86VP1 789 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 EPAS1Q99814 870 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 CRNKL1Q9BZJ0 848 aaKnown RBP14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 CSRNP2Q9H175 543 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 LIMA1Q9UHB6 759 aaKnown RBP14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 PDE2AO00408 941 aaPredicted RBP14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 FOXN1O15353 648 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 GYPCP04921 128 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 CYP2D6P10635 497 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 GNAT1P11488 350 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 HOXA7P31268 230 aaPredicted RBP14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 EZH2Q15910 746 aaKnown RBP14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 ZNF827Q17R98 1081 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 SPTY2D1Q68D10 685 aaPredicted RBP14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 PCMTD1Q96MG8 357 aaPredicted RBP14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 GPR101Q96P66 508 aaPredicted RBP14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 ANKIB1Q9P2G1 1089 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 ARPP21Q9UBL0 812 aaPredicted RBP14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 ACTN4O43707 911 aaKnown RBP14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 SMIM24O75264 130 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 PYGBP11216 843 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 AKT1S1Q96B36 256 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 HVCN1Q96D96 273 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 ALS2CR12Q96Q35 445 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 CRAMP1Q96RY5 1269 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 LRRC1Q9BTT6 524 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 JAG2Q9Y219 1238 aa14.8□□□□□ -0.04
SYNGAP1-204ENST00000449372 BICDL2A1A5D9 508 aa14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 DNAJC8O75937 253 aaPredicted RBP14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 COPB1P53618 953 aaKnown RBP14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 MRPS25P82663 173 aaKnown RBP14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 TXNRD1Q16881 649 aa14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 LACTB2Q53H82 288 aaPredicted RBP14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 CFAP58Q5T655 872 aa14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 ANKRD23Q86SG2 305 aa14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 NOP53Q9NZM5 478 aaKnown RBP14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 EPN1Q9Y6I3 576 aaPredicted RBP14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 GMNCA6NCL1 334 aa14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 CLTAP09496 248 aa14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 FAM163BP0C2L3 166 aa14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 EEF1GP26641 437 aaKnown RBP14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 KIF5BP33176 963 aa14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 STX17P56962 302 aa14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 TTC38Q5R3I4 469 aa14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 EMC10Q5UCC4 262 aa14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 PNMA8AQ86V59 439 aaPredicted RBP14.79□□□□□ -0.04
SYNGAP1-204ENST00000449372 CMTR1Q8N1G2 835 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms