RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 XIRP2A4UGR9 3374 aa16.76■□□□□ 0.27
USP39-206ENST00000448971 UMODL1Q5DID0 1318 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 SEC24BO95487 1268 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 FGBP02675 491 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 MYCLP12524 364 aaPredicted RBP16.75■□□□□ 0.27
USP39-206ENST00000448971 SMPD1P17405 629 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 PTGS1P23219 599 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 ADD1P35611 737 aaKnown RBP16.75■□□□□ 0.27
USP39-206ENST00000448971 NAPAP54920 295 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 CCT2P78371 535 aaKnown RBP16.75■□□□□ 0.27
USP39-206ENST00000448971 STXBP2Q15833 593 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 WWC2Q6AWC2 1192 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 IQSEC1Q6DN90 963 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 SCFD2Q8WU76 684 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 PPM1EQ8WY54 764 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 VWCEQ96DN2 955 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 IWS1Q96ST2 819 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 PDCD2LQ9BRP1 358 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 WDR11Q9BZH6 1224 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 AP5M1Q9H0R1 490 aa16.75■□□□□ 0.27
USP39-206ENST00000448971 FAM217BQ9NTX9 383 aaPredicted RBP16.75■□□□□ 0.27
USP39-206ENST00000448971 BAZ2BQ9UIF8 2168 aaKnown RBP16.75■□□□□ 0.27
USP39-206ENST00000448971 TRANK1O15050 2925 aa16.74■□□□□ 0.27
USP39-206ENST00000448971 hCG_1984214I3L0E3 225 aa16.74■□□□□ 0.27
USP39-206ENST00000448971 CABYRO75952 493 aa16.74■□□□□ 0.27
USP39-206ENST00000448971 NR3C2P08235 984 aa16.74■□□□□ 0.27
USP39-206ENST00000448971 PDIA3P30101 505 aaKnown RBP16.74■□□□□ 0.27
USP39-206ENST00000448971 AKAP17AQ02040 695 aaKnown RBP16.74■□□□□ 0.27
USP39-206ENST00000448971 STK3Q13188 491 aa16.74■□□□□ 0.27
USP39-206ENST00000448971 ITGA7Q13683 1181 aa16.74■□□□□ 0.27
USP39-206ENST00000448971 TMEM63BQ5T3F8 832 aa16.74■□□□□ 0.27
USP39-206ENST00000448971 PPP1R18Q6NYC8 613 aa16.74■□□□□ 0.27
USP39-206ENST00000448971 SEPT14Q6ZU15 432 aa16.74■□□□□ 0.27
USP39-206ENST00000448971 ZNF713Q8N859 430 aaPredicted RBP16.74■□□□□ 0.27
USP39-206ENST00000448971 ASB2Q96Q27 587 aa16.74■□□□□ 0.27
USP39-206ENST00000448971 LARP6Q9BRS8 491 aaKnown RBP16.74■□□□□ 0.27
USP39-206ENST00000448971 MSRAQ9UJ68 235 aa16.74■□□□□ 0.27
USP39-206ENST00000448971 YBX2Q9Y2T7 364 aaKnown RBP16.74■□□□□ 0.27
USP39-206ENST00000448971 V9GY48 417 aaPredicted RBP16.74■□□□□ 0.27
USP39-206ENST00000448971 GBF1Q92538 1859 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 CPLX1O14810 134 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 DYNC1LI2O43237 492 aaPredicted RBP16.73■□□□□ 0.27
USP39-206ENST00000448971 CCND2P30279 289 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 FUT2Q10981 343 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 TTLL4Q14679 1199 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 PGM5Q15124 567 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 RAB30Q15771 203 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 FSCN1Q16658 493 aaKnown RBP16.73■□□□□ 0.27
USP39-206ENST00000448971 DUSP28Q4G0W2 176 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 USP17L6PQ6QN14 398 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 OR6J1Q8NGC5 347 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 NOC4LQ9BVI4 516 aaKnown RBP16.73■□□□□ 0.27
USP39-206ENST00000448971 SEZ6LQ9BYH1 1024 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 TRPV6Q9H1D0 765 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 NKX2-4Q9H2Z4 354 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 HIPK3Q9H422 1215 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 PSTPIP2Q9H939 334 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 NCOA5Q9HCD5 579 aaKnown RBP16.73■□□□□ 0.27
USP39-206ENST00000448971 Q9Y3F1 56 aa16.73■□□□□ 0.27
USP39-206ENST00000448971 B4GALT4O60513 344 aa16.72■□□□□ 0.27
USP39-206ENST00000448971 PPFIA3O75145 1194 aa16.72■□□□□ 0.27
USP39-206ENST00000448971 TXNP10599 105 aaKnown RBP16.72■□□□□ 0.27
USP39-206ENST00000448971 CCL23P55773 120 aa16.72■□□□□ 0.27
USP39-206ENST00000448971 EVCP57679 992 aa16.72■□□□□ 0.27
USP39-206ENST00000448971 CCDC85BQ15834 202 aaPredicted RBP16.72■□□□□ 0.27
USP39-206ENST00000448971 UBE2SQ16763 222 aa16.72■□□□□ 0.27
USP39-206ENST00000448971 OTOP2Q7RTS6 562 aa16.72■□□□□ 0.27
USP39-206ENST00000448971 IL31RAQ8NI17 732 aa16.72■□□□□ 0.27
USP39-206ENST00000448971 PHKBQ93100 1093 aa16.72■□□□□ 0.27
USP39-206ENST00000448971 SLC26A6Q9BXS9 759 aa16.72■□□□□ 0.27
USP39-206ENST00000448971 WNT8AQ9H1J5 351 aa16.72■□□□□ 0.27
USP39-206ENST00000448971 MRVI1Q9Y6F6 885 aa16.72■□□□□ 0.27
USP39-206ENST00000448971 PRRC2BQ5JSZ5 2229 aaKnown RBP16.72■□□□□ 0.27
USP39-206ENST00000448971 RBM47A0AV96 593 aaKnown RBP16.71■□□□□ 0.27
USP39-206ENST00000448971 SPDYE3A6NKU9 549 aa16.71■□□□□ 0.27
USP39-206ENST00000448971 PIK3CDO00329 1044 aa16.71■□□□□ 0.27
USP39-206ENST00000448971 NKRFO15226 690 aaKnown RBP eCLIP16.71■□□□□ 0.27
USP39-206ENST00000448971 ZEB2O60315 1214 aa16.71■□□□□ 0.27
USP39-206ENST00000448971 EIF3JO75822 258 aaKnown RBP16.71■□□□□ 0.27
USP39-206ENST00000448971 SCG2P13521 617 aa16.71■□□□□ 0.27
USP39-206ENST00000448971 COL9A1P20849 921 aa16.71■□□□□ 0.27
USP39-206ENST00000448971 ADCY7P51828 1080 aa16.71■□□□□ 0.27
USP39-206ENST00000448971 ANKRD1Q15327 319 aa16.71■□□□□ 0.27
USP39-206ENST00000448971 PFKFB3Q16875 520 aaPredicted RBP16.71■□□□□ 0.27
USP39-206ENST00000448971 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.27
USP39-206ENST00000448971 SPOCK2Q92563 424 aa16.71■□□□□ 0.27
USP39-206ENST00000448971 ZNF274Q96GC6 653 aaPredicted RBP16.71■□□□□ 0.27
USP39-206ENST00000448971 RNF26Q9BY78 433 aaPredicted RBP16.71■□□□□ 0.27
USP39-206ENST00000448971 SLC28A3Q9HAS3 691 aa16.71■□□□□ 0.27
USP39-206ENST00000448971 BARHL2Q9NY43 387 aa16.71■□□□□ 0.27
USP39-206ENST00000448971 THEGQ9P2T0 379 aa16.71■□□□□ 0.27
USP39-206ENST00000448971 FRMPD4Q14CM0 1322 aa16.7■□□□□ 0.26
USP39-206ENST00000448971 STXBP3O00186 592 aa16.7■□□□□ 0.26
USP39-206ENST00000448971 MEIS2O14770 477 aa16.7■□□□□ 0.26
USP39-206ENST00000448971 ARIH2O95376 493 aa16.7■□□□□ 0.26
USP39-206ENST00000448971 IGFBP4P22692 258 aa16.7■□□□□ 0.26
USP39-206ENST00000448971 AK2P54819 239 aa16.7■□□□□ 0.26
USP39-206ENST00000448971 PSMC6P62333 389 aa16.7■□□□□ 0.26
USP39-206ENST00000448971 MRPS5P82675 430 aaKnown RBP16.7■□□□□ 0.26
USP39-206ENST00000448971 TYW1BQ6NUM6 668 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms