RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 TTI2Q6NXR4 508 aa19.79■□□□□ 0.76
LMNA-208ENST00000448611 DYMQ7RTS9 669 aa19.79■□□□□ 0.76
LMNA-208ENST00000448611 PITPNM2Q9BZ72 1349 aa19.79■□□□□ 0.76
LMNA-208ENST00000448611 NFIBO00712 420 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 CATSPER3Q86XQ3 398 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 IRF2BP1Q8IU81 584 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 ERMNQ8TAM6 284 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 HPS3Q969F9 1004 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 DNAJC19Q96DA6 116 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 C12orf42Q96LP6 360 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 RAVER2Q9HCJ3 691 aaKnown RBP19.78■□□□□ 0.76
LMNA-208ENST00000448611 STK24Q9Y6E0 443 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 KCNJ18B7U540 433 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 TEX33O43247 280 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 SPATA31C1P0DKV0 1188 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 CCNE1P24864 410 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 RPA1P27694 616 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 PBX1P40424 430 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 UBXN2AP68543 259 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 KCNJ12Q14500 433 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 KRT31Q15323 416 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 CEP55Q53EZ4 464 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 TCP11X2Q5H9J9 407 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 NOL9Q5SY16 702 aaKnown RBP19.78■□□□□ 0.76
LMNA-208ENST00000448611 CPXCR1Q8N123 301 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 P2RX5Q93086 422 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 DUSP9Q99956 384 aaKnown RBP19.78■□□□□ 0.76
LMNA-208ENST00000448611 COL20A1Q9P218 1284 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 ZHX2Q9Y6X8 837 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 RPTORQ8N122 1335 aa19.78■□□□□ 0.76
LMNA-208ENST00000448611 PHIPQ8WWQ0 1821 aa19.77■□□□□ 0.76
LMNA-208ENST00000448611 PLA2G4BP0C869 781 aa19.77■□□□□ 0.76
LMNA-208ENST00000448611 SUPT20HL1Q3ZLR7 823 aa19.77■□□□□ 0.76
LMNA-208ENST00000448611 MCF2L2Q86YR7 1114 aa19.77■□□□□ 0.76
LMNA-208ENST00000448611 SLC39A2Q9NP94 309 aa19.77■□□□□ 0.76
LMNA-208ENST00000448611 POTEFA5A3E0 1075 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 POTEIP0CG38 1075 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 FDX1P10109 184 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 ALAS1P13196 640 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 HOXA7P31268 230 aaPredicted RBP19.76■□□□□ 0.75
LMNA-208ENST00000448611 FILIP1LQ4L180 1135 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 POTEGQ6S5H5 508 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 POTEEQ6S8J3 1075 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 SLC5A5Q92911 643 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 TRIM47Q96LD4 638 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 TMX1Q9H3N1 280 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 THAP9Q9H5L6 903 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 ADARB2Q9NS39 739 aaKnown RBP19.76■□□□□ 0.75
LMNA-208ENST00000448611 RABGAP1Q9Y3P9 1069 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 PARP14Q460N5 1801 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 BICDL2A1A5D9 508 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 C19orf81C9J6K1 198 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 MEIS1O00470 390 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 VWA5AO00534 786 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 PSMD10O75832 226 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 IDEP14735 1019 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 PSMD2Q13200 908 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 MUM1L1Q5H9M0 696 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 OTOP1Q7RTM1 612 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.76■□□□□ 0.751e-21■■■□□ 14.8
LMNA-208ENST00000448611 NOC3LQ8WTT2 800 aaKnown RBP19.76■□□□□ 0.75
LMNA-208ENST00000448611 POLR3CQ9BUI4 534 aaPredicted RBP19.76■□□□□ 0.75
LMNA-208ENST00000448611 PNMA2Q9UL42 364 aa19.76■□□□□ 0.75
LMNA-208ENST00000448611 EML1O00423 815 aa19.75■□□□□ 0.75
LMNA-208ENST00000448611 ZBED4O75132 1171 aa19.75■□□□□ 0.75
LMNA-208ENST00000448611 COPB1P53618 953 aaKnown RBP19.75■□□□□ 0.75
LMNA-208ENST00000448611 HMGCS2P54868 508 aa19.75■□□□□ 0.75
LMNA-208ENST00000448611 SLC12A3P55017 1021 aa19.75■□□□□ 0.75
LMNA-208ENST00000448611 ANKRD40Q6AI12 368 aa19.75■□□□□ 0.75
LMNA-208ENST00000448611 SAMD3Q8N6K7 520 aa19.75■□□□□ 0.75
LMNA-208ENST00000448611 SRRTQ9BXP5 876 aaKnown RBP19.75■□□□□ 0.75
LMNA-208ENST00000448611 KCND1Q9NSA2 647 aa19.75■□□□□ 0.75
LMNA-208ENST00000448611 MAP3K20Q9NYL2 800 aaKnown RBP19.75■□□□□ 0.75
LMNA-208ENST00000448611 SSBP05455 408 aaKnown RBP eCLIP19.74■□□□□ 0.75
LMNA-208ENST00000448611 CYP11B2P19099 503 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 EEF1GP26641 437 aaKnown RBP19.74■□□□□ 0.75
LMNA-208ENST00000448611 KCNJ6P48051 423 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 SETQ01105 290 aaPredicted RBP19.74■□□□□ 0.75
LMNA-208ENST00000448611 COASYQ13057 564 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 PPP2R5CQ13362 524 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 LRCH2Q5VUJ6 765 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 GUF1Q8N442 669 aaKnown RBP19.74■□□□□ 0.75
LMNA-208ENST00000448611 ANKRD20A12PQ8NF67 263 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 ATG4CQ96DT6 458 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 WNK4Q96J92 1243 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 L3MBTL3Q96JM7 780 aaPredicted RBP19.74■□□□□ 0.75
LMNA-208ENST00000448611 BMP2KQ9NSY1 1161 aaPredicted RBP19.74■□□□□ 0.75
LMNA-208ENST00000448611 TAB2Q9NYJ8 693 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 USP2O75604 605 aaPredicted RBP19.74■□□□□ 0.75
LMNA-208ENST00000448611 PSMC6P62333 389 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 GOLGA8FQ08AF8 430 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 GOLGA8DPQ0D2H9 430 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 CENPPQ6IPU0 288 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 GPBP1Q86WP2 473 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 CSGALNACT2Q8N6G5 542 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 CCDC112Q8NEF3 446 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 SYTL5Q8TDW5 730 aaPredicted RBP19.74■□□□□ 0.75
LMNA-208ENST00000448611 EIF2AK1Q9BQI3 630 aaKnown RBP19.74■□□□□ 0.75
LMNA-208ENST00000448611 MXRA8Q9BRK3 442 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 SEMA6BQ9H3T3 888 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms