RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 HABP4Q5JVS0 413 aaKnown RBP28.63■■■□□ 2.17
UFD1-204ENST00000447868 CELF3Q5SZQ8 465 aaKnown RBP28.63■■■□□ 2.17
UFD1-204ENST00000447868 TRIM22Q8IYM9 498 aa28.63■■■□□ 2.17
UFD1-204ENST00000447868 CCDC12Q8WUD4 166 aaPredicted RBP28.63■■■□□ 2.17
UFD1-204ENST00000447868 EMID1Q96A84 441 aaPredicted RBP28.63■■■□□ 2.17
UFD1-204ENST00000447868 GLT8D2Q9H1C3 349 aa28.63■■■□□ 2.17
UFD1-204ENST00000447868 SLKQ9H2G2 1235 aaPredicted RBP28.63■■■□□ 2.17
UFD1-204ENST00000447868 CHMP4BP1P59074 171 aa28.62■■■□□ 2.17
UFD1-204ENST00000447868 MYSM1Q5VVJ2 828 aa28.62■■■□□ 2.17
UFD1-204ENST00000447868 CPLX2Q6PUV4 134 aaKnown RBP28.62■■■□□ 2.17
UFD1-204ENST00000447868 NLRX1Q86UT6 975 aa28.62■■■□□ 2.17
UFD1-204ENST00000447868 FAM126BQ8IXS8 530 aa28.62■■■□□ 2.17
UFD1-204ENST00000447868 SLC43A3Q8NBI5 491 aa28.62■■■□□ 2.17
UFD1-204ENST00000447868 PPP1R13LQ8WUF5 828 aa28.62■■■□□ 2.17
UFD1-204ENST00000447868 LTBP2Q14767 1821 aa28.62■■■□□ 2.17
UFD1-204ENST00000447868 SPATA31C2B4DYI2 1134 aa28.61■■■□□ 2.17
UFD1-204ENST00000447868 TLR3O15455 904 aaKnown RBP28.61■■■□□ 2.17
UFD1-204ENST00000447868 FIBPO43427 364 aa28.61■■■□□ 2.17
UFD1-204ENST00000447868 ICAM3P32942 547 aa28.61■■■□□ 2.17
UFD1-204ENST00000447868 SCRN1Q12765 414 aa28.61■■■□□ 2.17
UFD1-204ENST00000447868 SEMA3FQ13275 785 aa28.61■■■□□ 2.17
UFD1-204ENST00000447868 PPTC7Q8NI37 304 aa28.61■■■□□ 2.17
UFD1-204ENST00000447868 SPATA33Q96N06 139 aa28.61■■■□□ 2.17
UFD1-204ENST00000447868 ANO3Q9BYT9 981 aa28.61■■■□□ 2.17
UFD1-204ENST00000447868 MLXIPQ9HAP2 919 aa28.61■■■□□ 2.17
UFD1-204ENST00000447868 C6orf50Q9HD87 102 aa28.61■■■□□ 2.17
UFD1-204ENST00000447868 VPS54Q9P1Q0 977 aa28.61■■■□□ 2.17
UFD1-204ENST00000447868 FOSP01100 380 aaPredicted RBP28.6■■■□□ 2.17
UFD1-204ENST00000447868 DGKDQ16760 1214 aa28.6■■■□□ 2.17
UFD1-204ENST00000447868 JAKMIP3Q5VZ66 844 aa28.6■■■□□ 2.17
UFD1-204ENST00000447868 TEX2Q8IWB9 1127 aa28.6■■■□□ 2.17
UFD1-204ENST00000447868 BADQ92934 168 aa28.6■■■□□ 2.17
UFD1-204ENST00000447868 UBE2OQ9C0C9 1292 aaKnown RBP28.6■■■□□ 2.17
UFD1-204ENST00000447868 ZMYND12Q9H0C1 365 aa28.6■■■□□ 2.17
UFD1-204ENST00000447868 BCAS3Q9H6U6 928 aa28.6■■■□□ 2.17
UFD1-204ENST00000447868 DOCK5Q9H7D0 1870 aa28.59■■■□□ 2.17
UFD1-204ENST00000447868 ESYT2A0FGR8 921 aa28.59■■■□□ 2.17
UFD1-204ENST00000447868 KIAA0355O15063 1070 aa28.59■■■□□ 2.17
UFD1-204ENST00000447868 ADAMTS3O15072 1205 aa28.59■■■□□ 2.17
UFD1-204ENST00000447868 PFKFB2O60825 505 aa28.59■■■□□ 2.17
UFD1-204ENST00000447868 ITGB8P26012 769 aa28.59■■■□□ 2.17
UFD1-204ENST00000447868 CLK2P49760 499 aaKnown RBP28.59■■■□□ 2.17
UFD1-204ENST00000447868 AP3B2Q13367 1082 aa28.59■■■□□ 2.17
UFD1-204ENST00000447868 NBPF20Q3BBV1 942 aa28.59■■■□□ 2.17
UFD1-204ENST00000447868 FAM47CQ5HY64 1035 aa28.59■■■□□ 2.17
UFD1-204ENST00000447868 SEZ6LQ9BYH1 1024 aa28.59■■■□□ 2.17
UFD1-204ENST00000447868 SCN10AQ9Y5Y9 1956 aa28.59■■■□□ 2.17
UFD1-204ENST00000447868 RAG1P15918 1043 aa28.58■■■□□ 2.17
UFD1-204ENST00000447868 ITGB5P18084 799 aa28.58■■■□□ 2.17
UFD1-204ENST00000447868 BMP8BP34820 402 aa28.58■■■□□ 2.17
UFD1-204ENST00000447868 HSDL1Q3SXM5 330 aa28.58■■■□□ 2.17
UFD1-204ENST00000447868 CCDC148Q8NFR7 591 aa28.58■■■□□ 2.17
UFD1-204ENST00000447868 GPRASP2Q96D09 838 aa28.58■■■□□ 2.17
UFD1-204ENST00000447868 TRPV6Q9H1D0 765 aa28.58■■■□□ 2.17
UFD1-204ENST00000447868 UBIAD1Q9Y5Z9 338 aa28.58■■■□□ 2.17
UFD1-204ENST00000447868 DEXIO95424 95 aa28.57■■■□□ 2.16
UFD1-204ENST00000447868 CD4P01730 458 aa28.57■■■□□ 2.16
UFD1-204ENST00000447868 ZNF286BP0CG31 522 aa28.57■■■□□ 2.16
UFD1-204ENST00000447868 GNA11P29992 359 aa28.57■■■□□ 2.16
UFD1-204ENST00000447868 NEDD9Q14511 834 aa28.57■■■□□ 2.16
UFD1-204ENST00000447868 CYFIP1Q7L576 1253 aa28.57■■■□□ 2.16
UFD1-204ENST00000447868 TBX21Q9UL17 535 aa28.57■■■□□ 2.16
UFD1-204ENST00000447868 B4GALT4O60513 344 aa28.56■■■□□ 2.16
UFD1-204ENST00000447868 DTNBO60941 627 aa28.56■■■□□ 2.16
UFD1-204ENST00000447868 CDKL5O76039 1030 aa28.56■■■□□ 2.16
UFD1-204ENST00000447868 LARGE1O95461 756 aa28.56■■■□□ 2.16
UFD1-204ENST00000447868 REXO1Q8N1G1 1221 aaKnown RBP28.56■■■□□ 2.16
UFD1-204ENST00000447868 NECAB1Q8N987 351 aa28.56■■■□□ 2.16
UFD1-204ENST00000447868 KAT2BQ92831 832 aa28.56■■■□□ 2.16
UFD1-204ENST00000447868 PKD2L1Q9P0L9 805 aa28.56■■■□□ 2.16
UFD1-204ENST00000447868 NLRP5P59047 1200 aa28.55■■■□□ 2.16
UFD1-204ENST00000447868 MTMR1Q13613 665 aa28.55■■■□□ 2.16
UFD1-204ENST00000447868 ME3Q16798 604 aa28.55■■■□□ 2.16
UFD1-204ENST00000447868 METTL7BQ6UX53 244 aa28.55■■■□□ 2.16
UFD1-204ENST00000447868 RASGRP4Q8TDF6 673 aa28.55■■■□□ 2.16
UFD1-204ENST00000447868 CDHR1Q96JP9 859 aa28.55■■■□□ 2.16
UFD1-204ENST00000447868 AIFM3Q96NN9 605 aa28.55■■■□□ 2.16
UFD1-204ENST00000447868 C22orf23Q9BZE7 217 aa28.55■■■□□ 2.16
UFD1-204ENST00000447868 JADE2Q9NQC1 790 aa28.55■■■□□ 2.16
UFD1-204ENST00000447868 SH3GLB2Q9NR46 395 aa28.55■■■□□ 2.16
UFD1-204ENST00000447868 TRMT13Q9NUP7 481 aaKnown RBP28.55■■■□□ 2.16
UFD1-204ENST00000447868 TRIOBPQ9H2D6 2365 aa28.55■■■□□ 2.16
UFD1-204ENST00000447868 NOP56O00567 594 aaKnown RBP28.54■■■□□ 2.16
UFD1-204ENST00000447868 SREBF1P36956 1147 aa28.54■■■□□ 2.16
UFD1-204ENST00000447868 SP4Q02446 784 aa28.54■■■□□ 2.16
UFD1-204ENST00000447868 NFRKBQ6P4R8 1299 aa28.54■■■□□ 2.16
UFD1-204ENST00000447868 CYP2W1Q8TAV3 490 aa28.54■■■□□ 2.16
UFD1-204ENST00000447868 BICD2Q8TD16 824 aa28.54■■■□□ 2.16
UFD1-204ENST00000447868 SENP7Q9BQF6 1050 aa28.54■■■□□ 2.16
UFD1-204ENST00000447868 MXRA8Q9BRK3 442 aa28.54■■■□□ 2.16
UFD1-204ENST00000447868 PPP1R12CQ9BZL4 782 aa28.54■■■□□ 2.16
UFD1-204ENST00000447868 RANBP2P49792 3224 aaKnown RBP28.54■■■□□ 2.16
UFD1-204ENST00000447868 ATP9AO75110 1047 aa28.53■■■□□ 2.16
UFD1-204ENST00000447868 PPFIA4O75335 1185 aa28.53■■■□□ 2.16
UFD1-204ENST00000447868 TIMP1P01033 207 aa28.53■■■□□ 2.16
UFD1-204ENST00000447868 ZNF76P36508 570 aa28.53■■■□□ 2.16
UFD1-204ENST00000447868 ARHGAP4P98171 946 aa28.53■■■□□ 2.16
UFD1-204ENST00000447868 ALG1Q9BT22 464 aa28.53■■■□□ 2.16
UFD1-204ENST00000447868 TELO2Q9Y4R8 837 aa28.53■■■□□ 2.16
UFD1-204ENST00000447868 HOXD8P13378 290 aaPredicted RBP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms