RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 M6PRP20645 277 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 KCNA3P22001 575 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 USP11P51784 963 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 AP2B1P63010 937 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 IL9RQ01113 521 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 FCHO2Q0JRZ9 810 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 KIF6Q6ZMV9 814 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 HS2ST1Q7LGA3 356 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 PALM2Q8IXS6 379 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ZBTB9Q96C00 473 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 CDC5LQ99459 802 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 SLITRK6Q9H5Y7 841 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 PLGRKTQ9HBL7 147 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 C8orf4Q9NR00 106 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 SEL1LQ9UBV2 794 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 DIS3Q9Y2L1 958 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 ANGPTL3Q9Y5C1 460 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 C5orf60A6NFR6 353 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 CCDC160A6NGH7 325 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 TTC34A8MYJ7 566 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 MMEP08473 750 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 PABPC4LP0CB38 370 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 SERPINB3P29508 390 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ALDH18A1P54886 795 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 SGO2Q562F6 1265 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 TLDC1Q6P9B6 456 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 C1orf228Q6PIY5 440 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 NCCRP1Q6ZVX7 275 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 NET1Q7Z628 596 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 WDR75Q8IWA0 830 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 PTPRN2Q92932 1015 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 EVI5LQ96CN4 794 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 POLR3EQ9NVU0 708 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 DLGAP2Q9P1A6 1054 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ZMAT5Q9UDW3 170 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 STAP2Q9UGK3 403 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 EID1Q9Y6B2 187 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 FADS2P1A8MWK0 482 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 SPTLC2O15270 562 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ATP6V1G2O95670 118 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 SSBP05455 408 aaKnown RBP eCLIP3.16□□□□□ -1.9
CHD9-203ENST00000447540 CSTF2P33240 577 aaKnown RBP eCLIP3.16□□□□□ -1.92e-6■□□□□ 10.4
CHD9-203ENST00000447540 RGS21Q2M5E4 152 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 TRMT5Q32P41 509 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 TOR1AIP2Q8NFQ8 470 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 SGF29Q96ES7 293 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ROPN1BQ9BZX4 212 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 ROPN1Q9HAT0 212 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 TRPC7Q9HCX4 862 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 NDE1Q9NXR1 346 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ZNF232Q9UNY5 417 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 PVALEFA0A1B0GWK0 134 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 A6NHS1 94 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 NUTM2BA6NNL0 878 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 NUTM2EB1AL46 878 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 GAP43P17677 238 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 LMOD1P29536 600 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 TCF7P36402 384 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 GGCXP38435 758 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 TFAP4Q01664 338 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 LRRC63Q05C16 580 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 KCNA1Q09470 495 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 SCRN3Q0VDG4 424 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 FOXD1Q16676 465 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 SKIDA1Q1XH10 827 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 RALYLQ86SE5 291 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 TMEM237Q96Q45 408 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ARPC5LQ9BPX5 153 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 RHOBTB2Q9BYZ6 727 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 UTP11Q9Y3A2 253 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 EEF1GP26641 437 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 MARK3P27448 753 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 CTNNA1P35221 906 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 DNM2P50570 870 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 OXCT1P55809 520 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 GJA9P57773 515 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 CALCOCO2Q13137 446 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 MKRN4PQ13434 485 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 MARK2Q7KZI7 788 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 TTC6Q86TZ1 520 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 CHCHD4Q8N4Q1 142 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 GDAP1Q8TB36 358 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 HPS1Q92902 700 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 SEC16BQ96JE7 1060 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 NUDCD1Q96RS6 583 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 TMEM60Q9H2L4 133 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 GDPD2Q9HCC8 539 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ARIH1Q9Y4X5 557 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 MBD5Q9P267 1494 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 DEAF1O75398 565 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 APOA1P02647 267 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 NQO1P15559 274 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 MXI1P50539 228 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 STAT2P52630 851 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 CEBPZQ03701 1054 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 MRPL28Q13084 256 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 NFE2L1Q14494 772 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 MYBPC3Q14896 1274 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 TRIM71Q2Q1W2 868 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 CEP78Q5JTW2 689 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms