RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 FKBP1BP68106 108 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 SSRP1Q08945 709 aaKnown RBP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 FSTL1Q12841 308 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 EAPPQ56P03 285 aaPredicted RBP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 PI16Q6UXB8 463 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 APTXQ7Z2E3 356 aaKnown RBP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 ARMC9Q7Z3E5 817 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 SH3RF1Q7Z6J0 888 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 NOSTRINQ8IVI9 506 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 TRIM22Q8IYM9 498 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 CNPY4Q8N129 248 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 CERS5Q8N5B7 392 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 ANKLE1Q8NAG6 615 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 PRPF38AQ8NAV1 312 aaKnown RBP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 OR8K1Q8NGG5 319 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 FAM151AQ8WW52 585 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 SYMPKQ92797 1274 aaKnown RBP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 SH3GL2Q99962 352 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 FTOQ9C0B1 505 aaKnown RBP eCLIP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 NAPBQ9H115 298 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 VEZTQ9HBM0 779 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 SWAP70Q9UH65 585 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 PGAP2Q9UHJ9 254 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 HERC5Q9UII4 1024 aaKnown RBP8.45□□□□□ -1.06
TRIM4-204ENST00000447480 RWDD2AQ9UIY3 292 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 HPCAL4Q9UM19 191 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 PCDHGC3Q9UN70 934 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 JAG2Q9Y219 1238 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 CEP83Q9Y592 693 aa8.45□□□□□ -1.06
TRIM4-204ENST00000447480 TMEM232C9JQI7 657 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 CHUKO15111 745 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 EIF3HO15372 352 aaKnown RBP eCLIP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 TOMM70O94826 608 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 KIAA0754O94854 1291 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 MBD4O95243 580 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 IPO7O95373 1038 aaKnown RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 INPP5BP32019 993 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 CYLC1P35663 651 aaPredicted RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 METAP2P50579 478 aaKnown RBP eCLIP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 PRELPP51888 382 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 ADKP55263 362 aaKnown RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 PDE4BQ07343 736 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 RBL2Q08999 1139 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 PNOCQ13519 176 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 CUL4BQ13620 913 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 TBC1D10BQ4KMP7 808 aaPredicted RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 CCDC178Q5BJE1 867 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 FIGNQ5HY92 759 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 RAD9BQ6WBX8 426 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 ZSCAN29Q8IWY8 852 aaPredicted RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 CD302Q8IX05 232 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 ARFGAP2Q8N6H7 521 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 CAVIN3Q969G5 261 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 EMID1Q96A84 441 aaPredicted RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 ZBED3Q96IU2 234 aaPredicted RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 CABS1Q96KC9 395 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 PNKPQ96T60 521 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 CAPS2Q9BXY5 557 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 ACTR5Q9H9F9 607 aaPredicted RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 MRPL44Q9H9J2 332 aaKnown RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 RRAGCQ9HB90 399 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 NCOA5Q9HCD5 579 aaKnown RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 PI4KBQ9UBF8 816 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 ZNF70Q9UC06 446 aaPredicted RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 EPN1Q9Y6I3 576 aaPredicted RBP8.44□□□□□ -1.06
TRIM4-204ENST00000447480 SLC4A4Q9Y6R1 1079 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 TRPM7Q96QT4 1865 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 CDK5RAP2Q96SN8 1893 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 UTRNP46939 3433 aa8.44□□□□□ -1.06
TRIM4-204ENST00000447480 TCRBV5S4A2TA0A5A2 114 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 GOLGA6CA6NDK9 693 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 GOLGA6BA6NDN3 693 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 ZBTB43O43298 467 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 PPFIA3O75145 1194 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 FGAP02671 866 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 GOLGA6DP0CG33 693 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 BMP6P22004 513 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 EEF1GP26641 437 aaKnown RBP8.43□□□□□ -1.06
TRIM4-204ENST00000447480 EPS15P42566 896 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 IREB2P48200 963 aaKnown RBP8.43□□□□□ -1.06
TRIM4-204ENST00000447480 TRAPPC10P48553 1259 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 SMTNP53814 917 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 IFFO1Q0D2I5 559 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 SLMAPQ14BN4 828 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 MSS51Q4VC12 460 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 APOBEC3HQ6NTF7 200 aaKnown RBP8.43□□□□□ -1.06
TRIM4-204ENST00000447480 CDC42EP5Q6NZY7 148 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 KRT26Q7Z3Y9 468 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 SLC35F6Q8N357 371 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 CRACR2BQ8N4Y2 399 aaPredicted RBP8.43□□□□□ -1.06
TRIM4-204ENST00000447480 TRERF1Q96PN7 1200 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 STRBPQ96SI9 672 aaKnown RBP8.43□□□□□ -1.06
TRIM4-204ENST00000447480 DNAJC7Q99615 494 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 USB1Q9BQ65 265 aaKnown RBP8.43□□□□□ -1.06
TRIM4-204ENST00000447480 RIOK1Q9BRS2 568 aaKnown RBP8.43□□□□□ -1.06
TRIM4-204ENST00000447480 EDEM3Q9BZQ6 932 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 KRT23Q9C075 422 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 EHD4Q9H223 541 aa8.43□□□□□ -1.06
TRIM4-204ENST00000447480 CXorf56Q9H5V9 222 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms