RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 KIAA1328Q86T90 577 aa14.55□□□□□ -0.08
DDX56-206ENST00000446987 CCDC26Q8TAB7 109 aa14.55□□□□□ -0.08
DDX56-206ENST00000446987 RUBCNQ92622 972 aa14.55□□□□□ -0.08
DDX56-206ENST00000446987 BRF1Q92994 677 aa14.55□□□□□ -0.08
DDX56-206ENST00000446987 CALR3Q96L12 384 aaKnown RBP14.55□□□□□ -0.08
DDX56-206ENST00000446987 SH3GL2Q99962 352 aa14.55□□□□□ -0.08
DDX56-206ENST00000446987 SDF4Q9BRK5 362 aa14.55□□□□□ -0.08
DDX56-206ENST00000446987 HSD3B7Q9H2F3 369 aa14.55□□□□□ -0.08
DDX56-206ENST00000446987 PLEKHA4Q9H4M7 779 aa14.55□□□□□ -0.08
DDX56-206ENST00000446987 VCPKMTQ9H867 229 aa14.55□□□□□ -0.08
DDX56-206ENST00000446987 KAT14Q9H8E8 782 aa14.55□□□□□ -0.08
DDX56-206ENST00000446987 GRIN2DO15399 1336 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 TSPY2A6NKD2 308 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 B4E1Z4 1266 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 GOLGA8KD6RF30 607 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 H3BQV1 296 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 SLC27A2O14975 620 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 RANBP6O60518 1105 aaKnown RBP14.54□□□□□ -0.08
DDX56-206ENST00000446987 PFKFB2O60825 505 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 TSPY3P0CV98 308 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 TSPY8P0CW00 308 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 EZRP15311 586 aaKnown RBP14.54□□□□□ -0.08
DDX56-206ENST00000446987 STIM1Q13586 685 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 IFFO2Q5TF58 517 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 USP17L2Q6R6M4 530 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 MFSD6Q6ZSS7 791 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 RASGRP2Q7LDG7 609 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 SMARCC2Q8TAQ2 1214 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 SLC45A1Q9Y2W3 748 aa14.54□□□□□ -0.08
DDX56-206ENST00000446987 COL11A1P12107 1806 aaPredicted RBP14.54□□□□□ -0.08
DDX56-206ENST00000446987 CTAGE9A4FU28 777 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 E7EWF7 191 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 PES1O00541 588 aaKnown RBP14.53□□□□□ -0.08
DDX56-206ENST00000446987 PHACTR2O75167 634 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 ALDH1A1P00352 501 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 CYP2C8P10632 490 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 SLC8A1P32418 973 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 MYL5Q02045 173 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 RBBP5Q15291 538 aaKnown RBP14.53□□□□□ -0.08
DDX56-206ENST00000446987 TAF1CQ15572 869 aaPredicted RBP14.53□□□□□ -0.08
DDX56-206ENST00000446987 CEP85LQ5SZL2 805 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 CYB5R4Q7L1T6 521 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 CCDC148Q8NFR7 591 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 RPGRIP1Q96KN7 1286 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 NUCKS1Q9H1E3 243 aaKnown RBP14.53□□□□□ -0.08
DDX56-206ENST00000446987 RNF41Q9H4P4 317 aaPredicted RBP14.53□□□□□ -0.08
DDX56-206ENST00000446987 ACTR5Q9H9F9 607 aaPredicted RBP14.53□□□□□ -0.08
DDX56-206ENST00000446987 MGAMO43451 1857 aa14.53□□□□□ -0.08
DDX56-206ENST00000446987 HOXA7P31268 230 aaPredicted RBP14.52□□□□□ -0.08
DDX56-206ENST00000446987 ACTN3Q08043 901 aaPredicted RBP14.52□□□□□ -0.08
DDX56-206ENST00000446987 IFFO1Q0D2I5 559 aa14.52□□□□□ -0.08
DDX56-206ENST00000446987 TOB2Q14106 344 aaPredicted RBP14.52□□□□□ -0.08
DDX56-206ENST00000446987 LRRC47Q8N1G4 583 aaKnown RBP14.52□□□□□ -0.08
DDX56-206ENST00000446987 MKL1Q969V6 931 aa14.52□□□□□ -0.08
DDX56-206ENST00000446987 PANX2Q96RD6 677 aa14.52□□□□□ -0.08
DDX56-206ENST00000446987 SUGCTQ9HAC7 445 aa14.52□□□□□ -0.08
DDX56-206ENST00000446987 ARHGEF10LQ9HCE6 1279 aa14.52□□□□□ -0.08
DDX56-206ENST00000446987 TCP11L1Q9NUJ3 509 aa14.52□□□□□ -0.08
DDX56-206ENST00000446987 GOLGA6CA6NDK9 693 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 SERPINC1P01008 464 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 GOLGA6DP0CG33 693 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 EPB41P11171 864 aaKnown RBP14.52□□□□□ -0.09
DDX56-206ENST00000446987 PRPHP41219 470 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 LBX1P52954 281 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 USP14P54578 494 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 ANTXR2P58335 489 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 PDCD2Q16342 344 aaPredicted RBP14.52□□□□□ -0.09
DDX56-206ENST00000446987 ZC3H12AQ5D1E8 599 aaKnown RBP14.52□□□□□ -0.09
DDX56-206ENST00000446987 MB21D2Q8IYB1 491 aaPredicted RBP14.52□□□□□ -0.09
DDX56-206ENST00000446987 FAM177A1Q8N128 213 aaPredicted RBP14.52□□□□□ -0.09
DDX56-206ENST00000446987 ASCC2Q9H1I8 757 aaPredicted RBP14.52□□□□□ -0.09
DDX56-206ENST00000446987 CD248Q9HCU0 757 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 GOLGA6AQ9NYA3 693 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 RTEL1Q9NZ71 1219 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 ZSWIM5Q9P217 1185 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 TUBE1Q9UJT0 475 aa14.52□□□□□ -0.09
DDX56-206ENST00000446987 TLR2O60603 784 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 TTLL1O95922 423 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 CTCFP49711 727 aaPredicted RBP14.51□□□□□ -0.09
DDX56-206ENST00000446987 ATP2B2Q01814 1243 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 KRT32Q14532 448 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 SLMAPQ14BN4 828 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 CCDC40Q4G0X9 1142 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 EMC10Q5UCC4 262 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 WWC2Q6AWC2 1192 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 SPICE1Q8N0Z3 855 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 TC2NQ8N9U0 490 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 PAIP2Q9BPZ3 127 aaKnown RBP14.51□□□□□ -0.09
DDX56-206ENST00000446987 ZKSCAN3Q9BRR0 538 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 BEGAINQ9BUH8 593 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 TMOD4Q9NZQ9 345 aa14.51□□□□□ -0.09
DDX56-206ENST00000446987 PEX10O60683 326 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 NDUFB10O96000 172 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 BCRP11274 1271 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 CDR1P51861 262 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 CLNS1AP54105 237 aaKnown RBP14.5□□□□□ -0.09
DDX56-206ENST00000446987 SNCBQ16143 134 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 TTC19Q6DKK2 380 aaPredicted RBP14.5□□□□□ -0.09
DDX56-206ENST00000446987 OTUD7BQ6GQQ9 843 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 C17orf99Q6UX52 265 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms