RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 AP5M1Q9H0R1 490 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 HOMER2Q9NSB8 354 aa8.49□□□□□ -1.05
HDAC9-216ENST00000446646 SMG1Q96Q15 3661 aaKnown RBP8.49□□□□□ -1.05
HDAC9-216ENST00000446646 SIP14410 1827 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 FAM208BQ5VWN6 2430 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 STXBP3O00186 592 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 LCE2BO14633 110 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 BAIAP3O94812 1187 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 CD2BP2O95400 341 aaKnown RBP8.48□□□□□ -1.05
HDAC9-216ENST00000446646 MYL3P08590 195 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 FDX1P10109 184 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
HDAC9-216ENST00000446646 RFC2P35250 354 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 PURAQ00577 322 aaKnown RBP8.48□□□□□ -1.05
HDAC9-216ENST00000446646 HYAL1Q12794 435 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 MBTPS1Q14703 1052 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 EPC2Q52LR7 807 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 FAM47CQ5HY64 1035 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 TTC39AQ5SRH9 613 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 ADSSL1Q8N142 457 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 ANKRD35Q8N283 1001 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 SLF1Q9BQI6 1058 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 ARHGEF10LQ9HCE6 1279 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 SMC4Q9NTJ3 1288 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 MCM9Q9NXL9 1143 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 LIMD1Q9UGP4 676 aa8.48□□□□□ -1.05
HDAC9-216ENST00000446646 FLNBO75369 2602 aaKnown RBP8.48□□□□□ -1.05
HDAC9-216ENST00000446646 TANC1Q9C0D5 1861 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 PNMA6EA0A0J9YXQ4 647 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 PRKAB2O43741 272 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 LGR5O75473 907 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 SUPT20HL2P0C7V6 817 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 MMP16P51512 607 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 PRR20EP86478 221 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 PRR20CP86479 221 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 PRR20DP86480 221 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 PRR20BP86481 221 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 PRR20AP86496 221 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 RETREG2Q8NC44 543 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 WNT8BQ93098 351 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 PRRX2Q99811 253 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 OSBPL7Q9BZF2 842 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 ZMYND15Q9H091 742 aa8.47□□□□□ -1.05
HDAC9-216ENST00000446646 A1CFQ9NQ94 594 aaKnown RBP8.47□□□□□ -1.05
HDAC9-216ENST00000446646 DBNLQ9UJU6 430 aaKnown RBP8.47□□□□□ -1.05
HDAC9-216ENST00000446646 TRIP12Q14669 1992 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-216ENST00000446646 SCN10AQ9Y5Y9 1956 aa8.46□□□□□ -1.05
HDAC9-216ENST00000446646 GDF9O60383 454 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 DXOO77932 396 aaKnown RBP8.46□□□□□ -1.06
HDAC9-216ENST00000446646 NDUFB10O96000 172 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 CXCL10P02778 98 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 COPB2P35606 906 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 NBL1P41271 181 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 CHMP4BP1P59074 171 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 GPM6BQ13491 265 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 PKDCCQ504Y2 493 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 TIGD5Q53EQ6 642 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 TNNI3KQ59H18 835 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 LCORLQ8N3X6 602 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 TMEM105Q8N8V8 129 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 COPS5Q92905 334 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 KIFC2Q96AC6 838 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 NSUN3Q9H649 340 aaKnown RBP8.46□□□□□ -1.06
HDAC9-216ENST00000446646 DCP1AQ9NPI6 582 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-216ENST00000446646 FPGT-TNNI3KV9GXZ4 949 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 ATG2AQ2TAZ0 1938 aa8.46□□□□□ -1.06
HDAC9-216ENST00000446646 LOC730098B7Z3J9 87 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 H3BNC9 293 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 ATP2A1O14983 1001 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 GRM6O15303 877 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 IPO8O15397 1037 aaKnown RBP8.45□□□□□ -1.06
HDAC9-216ENST00000446646 ZEB2O60315 1214 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 CHGBP05060 677 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 CDK8P49336 464 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 SNAP25P60880 206 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 SMAD4Q13485 552 aaKnown RBP8.45□□□□□ -1.06
HDAC9-216ENST00000446646 MTX1Q13505 466 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 GDF6Q6KF10 455 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-216ENST00000446646 CNKSR3Q6P9H4 555 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 KIAA1211Q6ZU35 1233 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 TRMT2AQ8IZ69 625 aaKnown RBP8.45□□□□□ -1.06
HDAC9-216ENST00000446646 CHMP4CQ96CF2 233 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 CRBNQ96SW2 442 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 MTG1Q9BT17 334 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-216ENST00000446646 SEZ6LQ9BYH1 1024 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 SMOC2Q9H3U7 446 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 IGFLR1Q9H665 355 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 SLC38A10Q9HBR0 1119 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 FAM50BQ9Y247 325 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 NAV1Q8NEY1 1877 aa8.45□□□□□ -1.06
HDAC9-216ENST00000446646 MAGEB6P1A0A0J9YX57 407 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 FAM187AA6NFU0 413 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 LINC00271P0C7V0 271 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 NDUFV2P19404 249 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 HTRA4P83105 476 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-216ENST00000446646 SIGLEC14Q08ET2 396 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 BFSP2Q13515 415 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 CBX2Q14781 532 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-216ENST00000446646 PKN1Q16512 942 aa8.44□□□□□ -1.06
HDAC9-216ENST00000446646 PTPROQ16827 1216 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms