RNA–Protein interactions for RNA: ENST00000444869.5

COMMD3-202, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-202ENST00000444869 SP2Q02086 613 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 SEMA3FQ13275 785 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 DGKDQ16760 1214 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 CELF3Q5SZQ8 465 aaKnown RBP16.19■□□□□ 0.18
COMMD3-202ENST00000444869 MYSM1Q5VVJ2 828 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 PCNX4Q63HM2 1172 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 WWC2Q6AWC2 1192 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 C16orf59Q7L2K0 433 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 SESTD1Q86VW0 696 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 TEX2Q8IWB9 1127 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 DHX37Q8IY37 1157 aaKnown RBP16.19■□□□□ 0.18
COMMD3-202ENST00000444869 TMEM199Q8N511 208 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 GPKOWQ92917 476 aaPredicted RBP eCLIP16.19■□□□□ 0.18
COMMD3-202ENST00000444869 WNT8AQ9H1J5 351 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 PSTPIP2Q9H939 334 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 TRMT13Q9NUP7 481 aaKnown RBP16.19■□□□□ 0.18
COMMD3-202ENST00000444869 SSUH2Q9Y2M2 353 aa16.19■□□□□ 0.18
COMMD3-202ENST00000444869 SCN5AQ14524 2016 aa16.18■□□□□ 0.18
COMMD3-202ENST00000444869 hCG_1984214I3L0E3 225 aa16.18■□□□□ 0.18
COMMD3-202ENST00000444869 HAS3O00219 553 aa16.18■□□□□ 0.18
COMMD3-202ENST00000444869 GGPS1O95749 300 aa16.18■□□□□ 0.18
COMMD3-202ENST00000444869 CASTP20810 708 aaKnown RBP16.18■□□□□ 0.18
COMMD3-202ENST00000444869 GNPTABQ3T906 1256 aa16.18■□□□□ 0.18
COMMD3-202ENST00000444869 RASIP1Q5U651 963 aa16.18■□□□□ 0.18
COMMD3-202ENST00000444869 FAM109BQ6ICB4 259 aaPredicted RBP16.18■□□□□ 0.18
COMMD3-202ENST00000444869 TYW1BQ6NUM6 668 aa16.18■□□□□ 0.18
COMMD3-202ENST00000444869 PPP1R18Q6NYC8 613 aa16.18■□□□□ 0.18
COMMD3-202ENST00000444869 Q6ZUG5 572 aa16.18■□□□□ 0.18
COMMD3-202ENST00000444869 ZNF713Q8N859 430 aaPredicted RBP16.18■□□□□ 0.18
COMMD3-202ENST00000444869 BRF1Q92994 677 aa16.18■□□□□ 0.18
COMMD3-202ENST00000444869 ZFP91Q96JP5 570 aaPredicted RBP16.18■□□□□ 0.18
COMMD3-202ENST00000444869 RNPC3Q96LT9 517 aaKnown RBP16.18■□□□□ 0.18
COMMD3-202ENST00000444869 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.18■□□□□ 0.18
COMMD3-202ENST00000444869 SPATA31C2B4DYI2 1134 aa16.17■□□□□ 0.18
COMMD3-202ENST00000444869 FIBPO43427 364 aa16.17■□□□□ 0.18
COMMD3-202ENST00000444869 CENPBP07199 599 aaPredicted RBP16.17■□□□□ 0.18
COMMD3-202ENST00000444869 PSMA5P28066 241 aa16.17■□□□□ 0.18
COMMD3-202ENST00000444869 EVCP57679 992 aa16.17■□□□□ 0.18
COMMD3-202ENST00000444869 SMAD3P84022 425 aaKnown RBP16.17■□□□□ 0.18
COMMD3-202ENST00000444869 APOBRQ0VD83 1088 aa16.17■□□□□ 0.18
COMMD3-202ENST00000444869 HSDL1Q3SXM5 330 aa16.17■□□□□ 0.18
COMMD3-202ENST00000444869 TMEM240Q5SV17 173 aa16.17■□□□□ 0.18
COMMD3-202ENST00000444869 HEATR3Q7Z4Q2 680 aa16.17■□□□□ 0.18
COMMD3-202ENST00000444869 CTAGE1Q96RT6 745 aa16.17■□□□□ 0.18
COMMD3-202ENST00000444869 USP26Q9BXU7 913 aa16.17■□□□□ 0.18
COMMD3-202ENST00000444869 IL23AQ9NPF7 189 aa16.17■□□□□ 0.18
COMMD3-202ENST00000444869 PPFIA4O75335 1185 aa16.16■□□□□ 0.18
COMMD3-202ENST00000444869 CYP2C9P11712 490 aa16.16■□□□□ 0.18
COMMD3-202ENST00000444869 METAP2P50579 478 aaKnown RBP eCLIP16.16■□□□□ 0.18
COMMD3-202ENST00000444869 FGD1P98174 961 aa16.16■□□□□ 0.18
COMMD3-202ENST00000444869 UBE2SQ16763 222 aa16.16■□□□□ 0.18
COMMD3-202ENST00000444869 FAM47CQ5HY64 1035 aa16.16■□□□□ 0.18
COMMD3-202ENST00000444869 PSRC1Q6PGN9 363 aaPredicted RBP16.16■□□□□ 0.18
COMMD3-202ENST00000444869 Q7L0L9 218 aa16.16■□□□□ 0.18
COMMD3-202ENST00000444869 DEFB123Q8N688 67 aa16.16■□□□□ 0.18
COMMD3-202ENST00000444869 PPP1R13LQ8WUF5 828 aa16.16■□□□□ 0.18
COMMD3-202ENST00000444869 VWCEQ96DN2 955 aa16.16■□□□□ 0.18
COMMD3-202ENST00000444869 SPATA33Q96N06 139 aa16.16■□□□□ 0.18
COMMD3-202ENST00000444869 KATNAL1Q9BW62 490 aa16.16■□□□□ 0.18
COMMD3-202ENST00000444869 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
COMMD3-202ENST00000444869 TRIP12Q14669 1992 aaPredicted RBP16.15■□□□□ 0.18
COMMD3-202ENST00000444869 CCDC196A0A1B0GTZ2 297 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 STXBP3O00186 592 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 ZNF286BP0CG31 522 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 ADD1P35611 737 aaKnown RBP16.15■□□□□ 0.18
COMMD3-202ENST00000444869 PSEN2P49810 448 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 NEDD9Q14511 834 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 METTL7BQ6UX53 244 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 GBF1Q92538 1859 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 GPRASP2Q96D09 838 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 SENP7Q9BQF6 1050 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 TM6SF1Q9BZW5 370 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 BCAS3Q9H6U6 928 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 ZSWIM6Q9HCJ5 1215 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 RIC8AQ9NPQ8 531 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 MTMR10Q9NXD2 777 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 BARHL2Q9NY43 387 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 RTEL1Q9NZ71 1219 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 GTF2IRD1Q9UHL9 959 aa16.15■□□□□ 0.18
COMMD3-202ENST00000444869 SPDYE3A6NKU9 549 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 NAPAP54920 295 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 CCL23P55773 120 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 RBL2Q08999 1139 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 MFSD10Q14728 455 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 GDF6Q6KF10 455 aaPredicted RBP16.14■□□□□ 0.17
COMMD3-202ENST00000444869 ZNF365Q70YC5 407 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 RUFY3Q7L099 469 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 C16orf70Q9BSU1 422 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 MLXIPQ9HAP2 919 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 PCDHA6Q9UN73 950 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 PCDHA8Q9Y5H6 950 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 UBIAD1Q9Y5Z9 338 aa16.14■□□□□ 0.17
COMMD3-202ENST00000444869 SORBS3O60504 671 aa16.13■□□□□ 0.17
COMMD3-202ENST00000444869 ACRP10323 421 aa16.13■□□□□ 0.17
COMMD3-202ENST00000444869 ITGB5P18084 799 aa16.13■□□□□ 0.17
COMMD3-202ENST00000444869 CLK2P49760 499 aaKnown RBP16.13■□□□□ 0.17
COMMD3-202ENST00000444869 TOB2Q14106 344 aaPredicted RBP16.13■□□□□ 0.17
COMMD3-202ENST00000444869 NTRK3Q16288 839 aa16.13■□□□□ 0.17
COMMD3-202ENST00000444869 PTGISQ16647 500 aa16.13■□□□□ 0.17
COMMD3-202ENST00000444869 PFKFB3Q16875 520 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms