RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CELF3Q5SZQ8 465 aaKnown RBP12.55□□□□□ -0.4
SF3A1-203ENST00000444440 RNF20Q5VTR2 975 aa12.55□□□□□ -0.4
SF3A1-203ENST00000444440 NFRKBQ6P4R8 1299 aa12.55□□□□□ -0.4
SF3A1-203ENST00000444440 DHX32Q7L7V1 743 aaKnown RBP12.55□□□□□ -0.4
SF3A1-203ENST00000444440 DHX37Q8IY37 1157 aaKnown RBP12.55□□□□□ -0.4
SF3A1-203ENST00000444440 DHX38Q92620 1227 aaKnown RBP12.55□□□□□ -0.4
SF3A1-203ENST00000444440 SEZ6LQ9BYH1 1024 aa12.55□□□□□ -0.4
SF3A1-203ENST00000444440 RTEL1Q9NZ71 1219 aa12.55□□□□□ -0.4
SF3A1-203ENST00000444440 EVPLQ92817 2033 aa12.55□□□□□ -0.4
SF3A1-203ENST00000444440 SPTBN5Q9NRC6 3674 aaKnown RBP12.54□□□□□ -0.4
SF3A1-203ENST00000444440 TRANK1O15050 2925 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 HAS3O00219 553 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 PIK3CDO00329 1044 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 ADAMTS3O15072 1205 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 KPNA6O60684 536 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 CALM1P0DP23 149 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 CALM2P0DP24 149 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 CALM3P0DP25 149 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 HSPA4P34932 840 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 GNAQP50148 359 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 BRDTQ58F21 947 aaPredicted RBP12.54□□□□□ -0.4
SF3A1-203ENST00000444440 WWC2Q6AWC2 1192 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 PPTC7Q8NI37 304 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 WNT8BQ93098 351 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 INPP4AQ96PE3 977 aaPredicted RBP12.54□□□□□ -0.4
SF3A1-203ENST00000444440 LZTS2Q9BRK4 669 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 SEMA6BQ9H3T3 888 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 PPP4R2Q9NY27 417 aa12.54□□□□□ -0.4
SF3A1-203ENST00000444440 SEC63Q9UGP8 760 aaKnown RBP12.54□□□□□ -0.4
SF3A1-203ENST00000444440 NLRC5Q86WI3 1866 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 ATG2AQ2TAZ0 1938 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 XIRP2A4UGR9 3374 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 KLF18A0A0U1RQI7 1052 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 F2P00734 622 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 PSEN2P49810 448 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 ZNF200P98182 395 aaPredicted RBP12.53□□□□□ -0.4
SF3A1-203ENST00000444440 APOBRQ0VD83 1088 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 TRAF1Q13077 416 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 LAMC2Q13753 1193 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 GPNMBQ14956 572 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 DGKDQ16760 1214 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 ZNF697Q5TEC3 545 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 OTOP2Q7RTS6 562 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 HEATR3Q7Z4Q2 680 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 SESTD1Q86VW0 696 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 SMARCC2Q8TAQ2 1214 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 HERVK_113Q902F9 699 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 SPATA33Q96N06 139 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 JAKMIP1Q96N16 626 aaKnown RBP12.53□□□□□ -0.4
SF3A1-203ENST00000444440 C16orf70Q9BSU1 422 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 ALG1Q9BT22 464 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 HDAC6Q9UBN7 1215 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 STXBP5LQ9Y2K9 1186 aa12.53□□□□□ -0.4
SF3A1-203ENST00000444440 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.52□□□□□ -0.41
SF3A1-203ENST00000444440 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.52□□□□□ -0.41
SF3A1-203ENST00000444440 GOLGA8AA7E2F4 631 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 GOLGA8BA8MQT2 603 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 ZBTB43O43298 467 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 CASTP20810 708 aaKnown RBP12.52□□□□□ -0.41
SF3A1-203ENST00000444440 DNAJB2P25686 324 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 ICAM3P32942 547 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 PTPN11Q06124 597 aaPredicted RBP12.52□□□□□ -0.41
SF3A1-203ENST00000444440 MFSD10Q14728 455 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 PTGISQ16647 500 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 RTN1Q16799 776 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 KIAA0753Q2KHM9 967 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 TCTN1Q2MV58 587 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 PCNX4Q63HM2 1172 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 PSRC1Q6PGN9 363 aaPredicted RBP12.52□□□□□ -0.41
SF3A1-203ENST00000444440 Q6ZUG5 572 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 DEFB128Q7Z7B8 93 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 MYLIPQ8WY64 445 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 PGBD1Q96JS3 809 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 CDX2Q99626 313 aaPredicted RBP12.52□□□□□ -0.41
SF3A1-203ENST00000444440 PBX4Q9BYU1 374 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 PSTPIP2Q9H939 334 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 GTF2IRD1Q9UHL9 959 aa12.52□□□□□ -0.41
SF3A1-203ENST00000444440 SPATA31C2B4DYI2 1134 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 STXBP3O00186 592 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 ATP9AO75110 1047 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 FGBP02675 491 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 IQCF3P0C7M6 154 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 SUPT20HL2P0C7V6 817 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 ITGB5P18084 799 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 ADD1P35611 737 aaKnown RBP12.51□□□□□ -0.41
SF3A1-203ENST00000444440 KRT32Q14532 448 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 KCNV1Q6PIU1 500 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 TRAF7Q6Q0C0 670 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 CYFIP1Q7L576 1253 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 TRIM50Q86XT4 487 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 RBM28Q9NW13 759 aaKnown RBP12.51□□□□□ -0.41
SF3A1-203ENST00000444440 YBX2Q9Y2T7 364 aaKnown RBP12.51□□□□□ -0.41
SF3A1-203ENST00000444440 NID2Q14112 1375 aa12.51□□□□□ -0.41
SF3A1-203ENST00000444440 PITPNM1O00562 1244 aa12.5□□□□□ -0.41
SF3A1-203ENST00000444440 FIBPO43427 364 aa12.5□□□□□ -0.41
SF3A1-203ENST00000444440 LGALS2P05162 132 aa12.5□□□□□ -0.41
SF3A1-203ENST00000444440 TGFB3P10600 412 aa12.5□□□□□ -0.41
SF3A1-203ENST00000444440 MYOGP15173 224 aa12.5□□□□□ -0.41
SF3A1-203ENST00000444440 KCNA2P16389 499 aa12.5□□□□□ -0.41
SF3A1-203ENST00000444440 RPS6KB1P23443 525 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms