RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 MAF1Q9H063 256 aa10.69□□□□□ -0.7
SMPD4P1-203ENST00000443839 DNAJC25Q9H1X3 360 aa10.69□□□□□ -0.7
SMPD4P1-203ENST00000443839 TXNRD2Q9NNW7 524 aa10.69□□□□□ -0.7
SMPD4P1-203ENST00000443839 PCDHA5Q9Y5H7 936 aa10.69□□□□□ -0.7
SMPD4P1-203ENST00000443839 A0A087WWV3 80 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 GAS7O60861 476 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 SMC2O95347 1197 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 CAVIN2O95810 425 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 SLC25A27O95847 323 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 PRR29P0C7W0 189 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 ITGB5P18084 799 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 COPB2P35606 906 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 LRCH2Q5VUJ6 765 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 NCAPH2Q6IBW4 605 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 FAM200AQ8TCP9 573 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 GTF3C2Q8WUA4 911 aaPredicted RBP10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 STAMQ92783 540 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 CUEDC2Q9H467 287 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 RBPJLQ9UBG7 517 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 TUBE1Q9UJT0 475 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 SLC45A1Q9Y2W3 748 aa10.68□□□□□ -0.7
SMPD4P1-203ENST00000443839 CNMDO75829 334 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 ERCC3P19447 782 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 CCT6AP40227 531 aaKnown RBP10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 ZNF165P49910 485 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 MRPS9P82933 396 aaKnown RBP10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 MTMR1Q13613 665 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 NAALADL2Q58DX5 795 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 WDR78Q5VTH9 848 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 HAUS3Q68CZ6 603 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 ISM2Q6H9L7 571 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 NIPA1Q7RTP0 329 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 SH3RF1Q7Z6J0 888 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 ANKRD23Q86SG2 305 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 ERMNQ8TAM6 284 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 NAT10Q9H0A0 1025 aaKnown RBP10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 KDM3AQ9Y4C1 1321 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 TESPA1A2RU30 521 aaPredicted RBP10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 IPO5O00410 1097 aaKnown RBP10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 NR3C2P08235 984 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 ARP10275 920 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 BCRP11274 1271 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 CCND2P30279 289 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 ERVK-9P63128 1117 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 ERVK-24P63145 666 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 SPIRE1Q08AE8 756 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 DPCR1Q3MIW9 517 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 XRRA1Q6P2D8 792 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 SAPCD2Q86UD0 394 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 ANP32BQ92688 251 aaKnown RBP10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 SLC5A5Q92911 643 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 NUDT12Q9BQG2 462 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 WDR11Q9BZH6 1224 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 NT5C3AQ9H0P0 336 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 MAGEF1Q9HAY2 307 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 JADE2Q9NQC1 790 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 RRAGDQ9NQL2 400 aaPredicted RBP10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 KCNH7Q9NS40 1196 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 STK17AQ9UEE5 414 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 VAV3Q9UKW4 847 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 UBIAD1Q9Y5Z9 338 aa10.67□□□□□ -0.7
SMPD4P1-203ENST00000443839 PASKQ96RG2 1323 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 CHMP2AO43633 222 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 GTPBP6O43824 516 aaPredicted RBP10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 CASP1P29466 404 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 NLRP12P59046 1061 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 GRB10Q13322 594 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 VSIG10LQ86VR7 867 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 SMC1BQ8NDV3 1235 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 GPRC5AQ8NFJ5 357 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 PARK7Q99497 189 aaKnown RBP10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 BLZF1Q9H2G9 400 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 MROH8Q9H579 483 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 PKD2L1Q9P0L9 805 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 STK24Q9Y6E0 443 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 POTEB2H3BUK9 544 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 PSMD10O75832 226 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 GCLCP48506 637 aaPredicted RBP10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 CCNA1P78396 465 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 CNTN2Q02246 1040 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 DPYDQ12882 1025 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 DHX8Q14562 1220 aaKnown RBP10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 KCTD2Q14681 263 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 Q3C1V9 767 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 NT5DC1Q5TFE4 455 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 RGMBQ6NW40 437 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 C11orf57Q6ZUT1 292 aaPredicted RBP10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 RASAL3Q86YV0 1011 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 ANKRD13CQ8N6S4 541 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 DNERQ8NFT8 737 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 PNMA5Q96PV4 448 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 RIT2Q99578 217 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 MTRQ99707 1265 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 TEKT3Q9BXF9 490 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 KBTBD4Q9NVX7 518 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 ADD3Q9UEY8 706 aaKnown RBP10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 MAN1B1Q9UKM7 699 aa10.66□□□□□ -0.7
SMPD4P1-203ENST00000443839 POTEB3A0JP26 581 aa10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 DDX39AO00148 427 aaKnown RBP10.65□□□□□ -0.7
SMPD4P1-203ENST00000443839 KIF3CO14782 793 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms