RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 SUSD4Q5VX71 490 aa12.21□□□□□ -0.45
FN1-211ENST00000443816 DSTYKQ6XUX3 929 aa12.21□□□□□ -0.45
FN1-211ENST00000443816 KLHL7Q8IXQ5 586 aa12.21□□□□□ -0.45
FN1-211ENST00000443816 PLEKHF1Q96S99 279 aa12.21□□□□□ -0.45
FN1-211ENST00000443816 RIMBP3CA6NJZ7 1639 aa12.21□□□□□ -0.45
FN1-211ENST00000443816 RIMBP3BA6NNM3 1639 aa12.21□□□□□ -0.45
FN1-211ENST00000443816 RIMBP3Q9UFD9 1639 aa12.21□□□□□ -0.45
FN1-211ENST00000443816 NRKQ7Z2Y5 1582 aa12.21□□□□□ -0.45
FN1-211ENST00000443816 FCER1AP12319 257 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 PPARGP37231 505 aaPredicted RBP12.21□□□□□ -0.46
FN1-211ENST00000443816 ECE1P42892 770 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 C7orf31Q8N865 590 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 EXOC4Q96A65 974 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 PPP6R2O75170 966 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 BFSP1Q12934 665 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 UBN1Q9NPG3 1134 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 H7C0C1 242 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 KRIT1O00522 736 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 ATP5OP48047 213 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 UBXN2AP68543 259 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 SUGT1Q9Y2Z0 365 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 SETBP1Q9Y6X0 1596 aa12.21□□□□□ -0.46
FN1-211ENST00000443816 LDHAP00338 332 aaKnown RBP12.2□□□□□ -0.46
FN1-211ENST00000443816 ARPP19P56211 112 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 ARHGAP4P98171 946 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 PPFIA1Q13136 1202 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 RNF219Q5W0B1 726 aaPredicted RBP12.2□□□□□ -0.46
FN1-211ENST00000443816 PPFIBP2Q8ND30 876 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 TMEM106CQ9BVX2 250 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 MYO1FO00160 1098 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 NR2F2P24468 414 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 POLR2FP61218 127 aaKnown RBP12.2□□□□□ -0.46
FN1-211ENST00000443816 AFAP1L1Q8TED9 768 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 GANCQ8TET4 914 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 DHTKD1Q96HY7 919 aaPredicted RBP12.2□□□□□ -0.46
FN1-211ENST00000443816 MRPL47Q9HD33 250 aaKnown RBP12.2□□□□□ -0.46
FN1-211ENST00000443816 FAM114A2Q9NRY5 505 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 BTBD18B2RXH4 712 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 KCNK3O14649 394 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 TNFAIP2Q03169 654 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 RAB44Q7Z6P3 723 aaPredicted RBP12.2□□□□□ -0.46
FN1-211ENST00000443816 SIX6OS1Q8N1H7 587 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 VCX3BQ9H321 246 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 SH3GLB2Q9NR46 395 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 WDR46O15213 610 aaKnown RBP12.2□□□□□ -0.46
FN1-211ENST00000443816 KRT3P12035 628 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 ZNF131P52739 623 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 SCRN1Q12765 414 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 SAR1BQ9Y6B6 198 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 GH2P01242 217 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 RASSF2P50749 326 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 TRMT44Q8IYL2 757 aaKnown RBP12.2□□□□□ -0.46
FN1-211ENST00000443816 TRERF1Q96PN7 1200 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 STAP2Q9UGK3 403 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 PSMD2Q13200 908 aa12.2□□□□□ -0.46
FN1-211ENST00000443816 RPUSD2Q8IZ73 545 aaKnown RBP12.2□□□□□ -0.46
FN1-211ENST00000443816 TBC1D9BQ66K14 1250 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 KRBA2Q6ZNG9 492 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 MCUR1Q96AQ8 359 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 FAM149B1Q96BN6 582 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 USP17L10C9JJH3 530 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 AFPP02771 609 aaKnown RBP12.19□□□□□ -0.46
FN1-211ENST00000443816 FDX1P10109 184 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 MTMR1Q13613 665 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 ERO1AQ96HE7 468 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 FAM186BQ8IYM0 893 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 CACNA2D3Q8IZS8 1091 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 MCF2LO15068 1137 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 PSMB7Q99436 277 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 SGK1O00141 431 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 ARL4AP40617 200 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 LBHD1Q9BQE6 289 aaPredicted RBP12.19□□□□□ -0.46
FN1-211ENST00000443816 TOPORSQ9NS56 1045 aaPredicted RBP12.19□□□□□ -0.46
FN1-211ENST00000443816 PHKA2P46019 1235 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 C10orf76Q5T2E6 689 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 APOA5Q6Q788 366 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 PPP2R3CQ969Q6 453 aa12.19□□□□□ -0.46
FN1-211ENST00000443816 SPATA1Q5VX52 437 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 BZW1Q7L1Q6 419 aaKnown RBP12.18□□□□□ -0.46
FN1-211ENST00000443816 NOP9Q86U38 636 aaKnown RBP12.18□□□□□ -0.46
FN1-211ENST00000443816 MAP3K7O43318 606 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 ATF2P15336 505 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
FN1-211ENST00000443816 TSTA3Q13630 321 aaPredicted RBP12.18□□□□□ -0.46
FN1-211ENST00000443816 RAPH1Q70E73 1250 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 FBXO18Q8NFZ0 1043 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 CNOT6LQ96LI5 555 aaKnown RBP12.18□□□□□ -0.46
FN1-211ENST00000443816 AP3B2Q13367 1082 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 KCNV1Q6PIU1 500 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 LCORLQ8N3X6 602 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 CERKQ8TCT0 537 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 MTIF3Q9H2K0 278 aaKnown RBP12.18□□□□□ -0.46
FN1-211ENST00000443816 POLIQ9UNA4 740 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 SEC24BO95487 1268 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 FAM173BQ6P4H8 233 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 MINPP1Q9UNW1 487 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 ANGPTL3Q9Y5C1 460 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 KAT6AQ92794 2004 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 PPP4R3CPQ6ZMV5 832 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms