RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 A0A1W2PQY0 241 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 A6NJR5 290 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 SPATA31C2B4DYI2 1134 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 RGS20O76081 388 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 ZNF76P36508 570 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 ARHGAP4P98171 946 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 BEX3Q00994 111 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 MTMR1Q13613 665 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 SLC39A5Q6ZMH5 540 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 NIPA1Q7RTP0 329 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 FAM184AQ8NB25 1140 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 SENP7Q9BQF6 1050 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 MXRA8Q9BRK3 442 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 PHF20Q9BVI0 1012 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 MLXIPQ9HAP2 919 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 JADE2Q9NQC1 790 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 STARD7Q9NQZ5 370 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 NR2E3Q9Y5X4 410 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 UBIAD1Q9Y5Z9 338 aa12.36□□□□□ -0.43
HDAC6-211ENST00000443563 ALPK3Q96L96 1907 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 MYADML2A6NDP7 307 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 CTAGE5O15320 804 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 EVI5O60447 810 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 JAK2O60674 1132 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 GGPS1O95749 300 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 CYP3A4P08684 503 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 FDPSP14324 419 aaKnown RBP12.35□□□□□ -0.43
HDAC6-211ENST00000443563 ARHGAP1Q07960 439 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 DGKDQ16760 1214 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 CEP55Q53EZ4 464 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 CELF3Q5SZQ8 465 aaKnown RBP12.35□□□□□ -0.43
HDAC6-211ENST00000443563 TMEM63BQ5T3F8 832 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 KRT25Q7Z3Z0 450 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 PPTC7Q8NI37 304 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 COPS5Q92905 334 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 FERMT2Q96AC1 680 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 PGBD1Q96JS3 809 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 AIFM3Q96NN9 605 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 MROH7Q68CQ1 1323 aa12.35□□□□□ -0.43
HDAC6-211ENST00000443563 A0A0U1RQG5 324 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-211ENST00000443563 ITGB5P18084 799 aa12.34□□□□□ -0.43
HDAC6-211ENST00000443563 UBA1P22314 1058 aaKnown RBP12.34□□□□□ -0.43
HDAC6-211ENST00000443563 KRT2P35908 639 aa12.34□□□□□ -0.43
HDAC6-211ENST00000443563 USP11P51784 963 aa12.34□□□□□ -0.43
HDAC6-211ENST00000443563 SETQ01105 290 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-211ENST00000443563 NONOQ15233 471 aaKnown RBP eCLIP12.34□□□□□ -0.43
HDAC6-211ENST00000443563 MYSM1Q5VVJ2 828 aa12.34□□□□□ -0.43
HDAC6-211ENST00000443563 TMX3Q96JJ7 454 aa12.34□□□□□ -0.43
HDAC6-211ENST00000443563 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-211ENST00000443563 MTG1Q9BT17 334 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-211ENST00000443563 KCNJ14Q9UNX9 436 aa12.34□□□□□ -0.43
HDAC6-211ENST00000443563 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-211ENST00000443563 DOCK5Q9H7D0 1870 aa12.34□□□□□ -0.43
HDAC6-211ENST00000443563 CCDC194A0A1B0GVG4 234 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 M0R2N6 131 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 MEIS1O00470 390 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 NOP56O00567 594 aaKnown RBP12.33□□□□□ -0.44
HDAC6-211ENST00000443563 PPFIA4O75335 1185 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 MMP3P08254 477 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 MYL3P08590 195 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-211ENST00000443563 IRX5P78411 483 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-211ENST00000443563 PURAQ00577 322 aaKnown RBP12.33□□□□□ -0.44
HDAC6-211ENST00000443563 SP2Q02086 613 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 ST3GAL1Q11201 340 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 SEMA3FQ13275 785 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 SNX17Q15036 470 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 SAFBQ15424 915 aaKnown RBP eCLIP12.33□□□□□ -0.44
HDAC6-211ENST00000443563 LRRC26Q2I0M4 334 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 METTL7BQ6UX53 244 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 CXCL17Q6UXB2 119 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 RASGRP4Q8TDF6 673 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 AFG1LQ8WV93 481 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 CRYGNQ8WXF5 182 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 SPATA33Q96N06 139 aa12.33□□□□□ -0.44
HDAC6-211ENST00000443563 NAP1L4Q99733 375 aaKnown RBP12.33□□□□□ -0.44
HDAC6-211ENST00000443563 ARVCFO00192 962 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 MMP1P03956 469 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 KCNA2P16389 499 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 PTGS1P23219 599 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 CIITAP33076 1130 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 RTP1P59025 263 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 NPY5RQ15761 445 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 CYFIP1Q7L576 1253 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 PLA2G4DQ86XP0 818 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 TBCKQ8TEA7 893 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 C8orf76Q96K31 380 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 TOX2Q96NM4 488 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 SDF4Q9BRK5 362 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 KATNAL1Q9BW62 490 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 KCNH7Q9NS40 1196 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 PRKAG2Q9UGJ0 569 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 TCEAL9Q9UHQ7 104 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 ATP11BQ9Y2G3 1177 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 NFASCO94856 1347 aa12.32□□□□□ -0.44
HDAC6-211ENST00000443563 DCDC2CA8MYV0 355 aa12.31□□□□□ -0.44
HDAC6-211ENST00000443563 ADAMTS3O15072 1205 aa12.31□□□□□ -0.44
HDAC6-211ENST00000443563 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms