RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 P2RX5Q93086 422 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 CDHR1Q96JP9 859 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 AGBL1Q96MI9 1066 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 MXRA8Q9BRK3 442 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 ZNF577Q9BSK1 485 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 MMTAG2Q9BU76 263 aaKnown RBP6.72□□□□□ -1.33
VPS50-205ENST00000441602 TEX13BQ9BXU2 312 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 THAP9Q9H5L6 903 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 KIAA1024Q9UPX6 916 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS50-205ENST00000441602 DICER1Q9UPY3 1922 aaKnown RBP6.72□□□□□ -1.33
VPS50-205ENST00000441602 DOCK1Q14185 1865 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 CXCL11O14625 94 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 GAP43P17677 238 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 IRX3P78415 501 aaPredicted RBP6.72□□□□□ -1.33
VPS50-205ENST00000441602 ARHGEF16Q5VV41 709 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 ERO1BQ86YB8 467 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 CRYGNQ8WXF5 182 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 SLC5A5Q92911 643 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 ZKSCAN4Q969J2 545 aaPredicted RBP6.72□□□□□ -1.33
VPS50-205ENST00000441602 ATG4CQ96DT6 458 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 ACAD9Q9H845 621 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 TBC1D22BQ9NU19 505 aa6.72□□□□□ -1.33
VPS50-205ENST00000441602 VWA5AO00534 786 aa6.71□□□□□ -1.33
VPS50-205ENST00000441602 N4BP3O15049 544 aa6.71□□□□□ -1.33
VPS50-205ENST00000441602 MSH4O15457 936 aa6.71□□□□□ -1.33
VPS50-205ENST00000441602 PRKG1Q13976 671 aa6.71□□□□□ -1.33
VPS50-205ENST00000441602 TSR1Q2NL82 804 aaKnown RBP6.71□□□□□ -1.33
VPS50-205ENST00000441602 FAM26FQ5R3K3 315 aa6.71□□□□□ -1.33
VPS50-205ENST00000441602 MIER3Q7Z3K6 550 aa6.71□□□□□ -1.33
VPS50-205ENST00000441602 VSTM4Q8IW00 320 aa6.71□□□□□ -1.33
VPS50-205ENST00000441602 GUF1Q8N442 669 aaKnown RBP6.71□□□□□ -1.33
VPS50-205ENST00000441602 CHST13Q8NET6 341 aa6.71□□□□□ -1.33
VPS50-205ENST00000441602 IQCDQ96DY2 449 aa6.71□□□□□ -1.33
VPS50-205ENST00000441602 PANK4Q9NVE7 773 aa6.71□□□□□ -1.33
VPS50-205ENST00000441602 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.71□□□□□ -1.33
VPS50-205ENST00000441602 SCAF8Q9UPN6 1271 aaKnown RBP6.71□□□□□ -1.33
VPS50-205ENST00000441602 STAM2O75886 525 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 EYA4O95677 639 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 ZNF18P17022 549 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 BMP6P22004 513 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 OSBPP22059 807 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 CASP1P29466 404 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 HIRAP54198 1017 aaPredicted RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 PPATQ06203 517 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 FMR1Q06787 632 aaKnown RBP eCLIP6.71□□□□□ -1.344e-6■■■■□ 21.6
VPS50-205ENST00000441602 FKBP15Q5T1M5 1219 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 PCNX4Q63HM2 1172 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 SNRNP48Q6IEG0 339 aaKnown RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 FOXR2Q6PJQ5 311 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 CATSPERGQ6ZRH7 1159 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 PROCA1Q8NCQ7 364 aaPredicted RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 SYTL5Q8TDW5 730 aaPredicted RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 GTF3C2Q8WUA4 911 aaPredicted RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 NACC1Q96RE7 527 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 HOMER2Q9NSB8 354 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 BLOC1S4Q9NUP1 217 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 LIMA1Q9UHB6 759 aaKnown RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 GDAQ9Y2T3 454 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 RPTORQ8N122 1335 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 MYMKA6NI61 221 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 UNCXA6NJT0 531 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 KIF2AO00139 706 aaPredicted RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 MEIS1O00470 390 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 OPLAHO14841 1288 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 ATP2A1O14983 1001 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 KLRC4O43908 158 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 USP2O75604 605 aaPredicted RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 PRKCSHP14314 528 aaPredicted RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 PRCPP42785 496 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 MTIF2P46199 727 aaKnown RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 LRRC63Q05C16 580 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 PPP2R5CQ13362 524 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 GNPTABQ3T906 1256 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 PRAMEF18Q5VWM3 479 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 GADL1Q6ZQY3 521 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 FASTKD5Q7L8L6 764 aaKnown RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 CREBRFQ8IUR6 639 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 MYOCDQ8IZQ8 938 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 CSGALNACT2Q8N6G5 542 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 RDM1Q8NG50 284 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 NSUN6Q8TEA1 469 aaKnown RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 DDX12PQ92771 950 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 CDCA5Q96FF9 252 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 ZHX3Q9H4I2 956 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 RRAGDQ9NQL2 400 aaPredicted RBP6.71□□□□□ -1.34
VPS50-205ENST00000441602 COL4A3BPQ9Y5P4 624 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 ATAD5Q96QE3 1844 aa6.71□□□□□ -1.34
VPS50-205ENST00000441602 POTEB3A0JP26 581 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 DCAF8L1A6NGE4 600 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 POTECB2RU33 542 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 KCNJ18B7U540 433 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 FAM86B1E9PN63 330 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 MAFGO15525 162 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 FAM13AO94988 1023 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 FAM86B2P0C5J1 330 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 ATP1A3P13637 1013 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 STAT3P40763 770 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 JAK3P52333 1124 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 KRT76Q01546 638 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms