RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 HERC2P3Q9BVR0 1158 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 AGTPBP1Q9UPW5 1226 aa11.7□□□□□ -0.54
SYNE2-206ENST00000441438 DNMT3AQ9Y6K1 912 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-206ENST00000441438 MAGEA10P43363 369 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-206ENST00000441438 ZNF280AP59817 542 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-206ENST00000441438 CD83Q01151 205 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 BECN1Q14457 450 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 EMC10Q5UCC4 262 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 CCDC30Q5VVM6 783 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 METTL11BQ5VVY1 283 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 CAPN12Q6ZSI9 719 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-206ENST00000441438 FATE1Q969F0 183 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 PPM1MQ96MI6 270 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 GPATCH1Q9BRR8 931 aaKnown RBP11.69□□□□□ -0.54
SYNE2-206ENST00000441438 DDX18Q9NVP1 670 aaKnown RBP11.69□□□□□ -0.54
SYNE2-206ENST00000441438 MTUS1Q9ULD2 1270 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 TRAF3IP3Q9Y228 551 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 SLC4A4Q9Y6R1 1079 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 C1orf167Q5SNV9 1468 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 ZNF521Q96K83 1311 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 SSH2Q76I76 1423 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 PPEF1O14829 653 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-206ENST00000441438 POLR3GO15318 223 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-206ENST00000441438 KRT1P04264 644 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 HADHAP40939 763 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 PPP1R7Q15435 360 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 TSGA10IPQ3SY00 556 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 SPATA1Q5VX52 437 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 CEP135Q66GS9 1140 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 RNF214Q8ND24 703 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 RHOBTB2Q9BYZ6 727 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 ANTXR1Q9H6X2 564 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 GPR108Q9NPR9 543 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 POGKQ9P215 609 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 PHTF1Q9UMS5 762 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 DUSP12Q9UNI6 340 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 METP08581 1390 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 LMO7Q8WWI1 1683 aa11.69□□□□□ -0.54
SYNE2-206ENST00000441438 SYNJ2BP-COX16A0A087WUM0 186 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 CYP2D7A0A087X1C5 515 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 BAG2O95816 211 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 PPA1Q15181 289 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 MAJINQ3KP22 176 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 ESX1Q8N693 406 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 ZNF454Q8N9F8 522 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 SPATA5Q8NB90 893 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 FAM200AQ8TCP9 573 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 KIF1BPQ96EK5 621 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 RRP7AQ9Y3A4 280 aaKnown RBP11.68□□□□□ -0.54
SYNE2-206ENST00000441438 USP17L3A6NCW0 530 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 USP17L4A6NCW7 530 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 KCNJ13O60928 360 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 OASLQ15646 514 aaKnown RBP11.68□□□□□ -0.54
SYNE2-206ENST00000441438 USP17L2Q6R6M4 530 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 USP17L1Q7RTZ2 530 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 FAM114A1Q8IWE2 563 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 C1orf216Q8TAB5 229 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 TNKS2Q9H2K2 1166 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 SYNCQ9H7C4 482 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 STRN4Q9NRL3 753 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 ABCF3Q9NUQ8 709 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 MTRRQ9UBK8 725 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 F5H423 210 aaPredicted RBP11.68□□□□□ -0.54
SYNE2-206ENST00000441438 OFD1O75665 1012 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 PRKAR2AP13861 404 aaKnown RBP11.68□□□□□ -0.54
SYNE2-206ENST00000441438 OSBPP22059 807 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 CDR1P51861 262 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 IKQ13123 557 aaPredicted RBP11.68□□□□□ -0.54
SYNE2-206ENST00000441438 RADILQ96JH8 1075 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 TSGA10Q9BZW7 698 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 GLT8D2Q9H1C3 349 aa11.68□□□□□ -0.54
SYNE2-206ENST00000441438 SPATA31A6Q5VVP1 1343 aa11.67□□□□□ -0.54
SYNE2-206ENST00000441438 ZBTB14O43829 449 aa11.67□□□□□ -0.54
SYNE2-206ENST00000441438 SNUPNO95149 360 aaKnown RBP11.67□□□□□ -0.54
SYNE2-206ENST00000441438 DNTTP04053 509 aa11.67□□□□□ -0.54
SYNE2-206ENST00000441438 RELQ04864 619 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-206ENST00000441438 TBC1D8BQ0IIM8 1120 aa11.67□□□□□ -0.54
SYNE2-206ENST00000441438 GALEQ14376 348 aa11.67□□□□□ -0.54
SYNE2-206ENST00000441438 SSPNQ14714 243 aa11.67□□□□□ -0.54
SYNE2-206ENST00000441438 IL17RDQ8NFM7 739 aa11.67□□□□□ -0.54
SYNE2-206ENST00000441438 GTF3C2Q8WUA4 911 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-206ENST00000441438 ZNF624Q9P2J8 865 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-206ENST00000441438 SEPT3Q9UH03 358 aa11.67□□□□□ -0.54
SYNE2-206ENST00000441438 PLSCR1O15162 318 aa11.67□□□□□ -0.54
SYNE2-206ENST00000441438 TPH2Q8IWU9 490 aa11.67□□□□□ -0.54
SYNE2-206ENST00000441438 GPR52Q9Y2T5 361 aa11.67□□□□□ -0.54
SYNE2-206ENST00000441438 ABHD14A-ACY1A0A1B0GW23 586 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 SSBP05455 408 aaKnown RBP eCLIP11.66□□□□□ -0.54
SYNE2-206ENST00000441438 EVCP57679 992 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 AP1B1Q10567 949 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 LEKR1Q6ZMV7 388 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 GOT1L1Q8NHS2 421 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-206ENST00000441438 CHAC2Q8WUX2 184 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 UQCC2Q9BRT2 126 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 NKIRAS2Q9NYR9 191 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 EDARQ9UNE0 448 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 EYA2O00167 538 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 SGSM2O43147 1006 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms