RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 ZNF662Q6ZS27 426 aa7.03□□□□□ -1.28
PFDN4-202ENST00000441080 C16orf59Q7L2K0 433 aa7.03□□□□□ -1.28
PFDN4-202ENST00000441080 IGSF22Q8N9C0 903 aa7.03□□□□□ -1.28
PFDN4-202ENST00000441080 CELF4Q9BZC1 486 aaKnown RBP7.03□□□□□ -1.28
PFDN4-202ENST00000441080 EPB41L4BQ9H329 900 aa7.03□□□□□ -1.28
PFDN4-202ENST00000441080 NSUN3Q9H649 340 aaKnown RBP7.03□□□□□ -1.28
PFDN4-202ENST00000441080 SLC6A20Q9NP91 592 aa7.03□□□□□ -1.28
PFDN4-202ENST00000441080 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.03□□□□□ -1.28
PFDN4-202ENST00000441080 PRKAB1Q9Y478 270 aa7.03□□□□□ -1.28
PFDN4-202ENST00000441080 LRRC10BA6NIK2 292 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 HGSO14964 777 aaPredicted RBP7.02□□□□□ -1.29
PFDN4-202ENST00000441080 SGSM2O43147 1006 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 MAFKO60675 156 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 NPTXRO95502 500 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 KCNA6P17658 529 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 YBX1P67809 324 aaKnown RBP7.02□□□□□ -1.29
PFDN4-202ENST00000441080 PRR5P85299 388 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 CRY1Q16526 586 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 MLANAQ16655 118 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 EMC4Q5J8M3 183 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 PRR23BQ6ZRT6 265 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 UBE2R2Q712K3 238 aaPredicted RBP7.02□□□□□ -1.29
PFDN4-202ENST00000441080 CISD2Q8N5K1 135 aaKnown RBP7.02□□□□□ -1.29
PFDN4-202ENST00000441080 TARS2Q9BW92 718 aaKnown RBP7.02□□□□□ -1.29
PFDN4-202ENST00000441080 ZNF552Q9H707 407 aaPredicted RBP7.02□□□□□ -1.29
PFDN4-202ENST00000441080 DCP1AQ9NPI6 582 aaPredicted RBP7.02□□□□□ -1.29
PFDN4-202ENST00000441080 CBLCQ9ULV8 474 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 HCFC2Q9Y5Z7 792 aa7.02□□□□□ -1.29
PFDN4-202ENST00000441080 HRKO00198 91 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 NKRFO15226 690 aaKnown RBP eCLIP7.01□□□□□ -1.29
PFDN4-202ENST00000441080 PDE8AO60658 829 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 ZBTB7AO95365 584 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 MASP1P48740 699 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 NEK4P51957 841 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 SLC9A5Q14940 896 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 CFAP100Q494V2 611 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 HABP4Q5JVS0 413 aaKnown RBP7.01□□□□□ -1.29
PFDN4-202ENST00000441080 RNF187Q5TA31 235 aaPredicted RBP7.01□□□□□ -1.29
PFDN4-202ENST00000441080 PIK3R6Q5UE93 754 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 TMC6Q7Z403 805 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 PPM1KQ8N3J5 372 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 DDX1Q92499 740 aaKnown RBP7.01□□□□□ -1.29
PFDN4-202ENST00000441080 SAMD15Q9P1V8 674 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 PALD1Q9ULE6 856 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 ZNF652Q9Y2D9 606 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 PCDHB4Q9Y5E5 795 aa7.01□□□□□ -1.29
PFDN4-202ENST00000441080 A0A087X0B3 334 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 M0R2C6 588 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 KPNA6O60684 536 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 PDE6AP16499 860 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 KRT15P19012 456 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 VIPR1P32241 457 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 GPR19Q15760 415 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 TMEM177Q53S58 311 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 CDCA2Q69YH5 1023 aaPredicted RBP7□□□□□ -1.29
PFDN4-202ENST00000441080 CYP4F22Q6NT55 531 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 ARHGAP36Q6ZRI8 547 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 MILR1Q7Z6M3 343 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 UHMK1Q8TAS1 419 aaKnown RBP7□□□□□ -1.29
PFDN4-202ENST00000441080 TSPAN17Q96FV3 270 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 TMX1Q9H3N1 280 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 SMOC1Q9H4F8 434 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 MYOTQ9UBF9 498 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 DSEQ9UL01 958 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 NUB1Q9Y5A7 615 aa7□□□□□ -1.29
PFDN4-202ENST00000441080 GSG1L2A8MUP6 293 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 ZNF561-AS1K7EIQ3 104 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 SLC27A2O14975 620 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 TADA3O75528 432 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 GLRX3O76003 335 aaKnown RBP6.99□□□□□ -1.29
PFDN4-202ENST00000441080 POU3F2P20265 443 aaPredicted RBP6.99□□□□□ -1.29
PFDN4-202ENST00000441080 SRSF3P84103 164 aaKnown RBP6.99□□□□□ -1.29
PFDN4-202ENST00000441080 EP400NLQ6ZTU2 488 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 OSTM1Q86WC4 334 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 AHI1Q8N157 1196 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 PHOSPHO1Q8TCT1 267 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 ALG3Q92685 438 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 WNK4Q96J92 1243 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 BCAS3Q9H6U6 928 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 SIRT5Q9NXA8 310 aa6.99□□□□□ -1.29
PFDN4-202ENST00000441080 TCRBV5S4A2TA0A5A2 114 aa6.98□□□□□ -1.29
PFDN4-202ENST00000441080 FAM83GA6ND36 823 aa6.98□□□□□ -1.29
PFDN4-202ENST00000441080 PEX10O60683 326 aa6.98□□□□□ -1.29
PFDN4-202ENST00000441080 DNAJC6O75061 913 aa6.98□□□□□ -1.29
PFDN4-202ENST00000441080 JAM2P57087 298 aa6.98□□□□□ -1.29
PFDN4-202ENST00000441080 LACTBP83111 547 aaPredicted RBP6.98□□□□□ -1.29
PFDN4-202ENST00000441080 ZNF200P98182 395 aaPredicted RBP6.98□□□□□ -1.29
PFDN4-202ENST00000441080 OVCH1Q7RTY7 1134 aa6.98□□□□□ -1.29
PFDN4-202ENST00000441080 FILIP1Q7Z7B0 1213 aa6.98□□□□□ -1.29
PFDN4-202ENST00000441080 PTRH1Q86Y79 214 aaKnown RBP6.98□□□□□ -1.29
PFDN4-202ENST00000441080 THNSL2Q86YJ6 484 aa6.98□□□□□ -1.29
PFDN4-202ENST00000441080 SPC25Q9HBM1 224 aa6.98□□□□□ -1.29
PFDN4-202ENST00000441080 MAPRE3Q9UPY8 281 aa6.98□□□□□ -1.29
PFDN4-202ENST00000441080 MYOCOSA0A1B0GUC4 107 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 TCRBV5S2A0A599 114 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 ANKRD62A6NC57 917 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 CBX4O00257 560 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 AMY2AP04746 511 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 AMY2BP19961 511 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 STAT3P40763 770 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms