RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ALS2CR12Q96Q35 445 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 MYH2Q9UKX2 1941 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 LDHBP07195 334 aaKnown RBP13.14□□□□□ -0.31
LTBR-203ENST00000441074 PMS1P54277 932 aaKnown RBP13.14□□□□□ -0.31
LTBR-203ENST00000441074 TBC1D8BQ0IIM8 1120 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 IFIT1BQ5T764 474 aaKnown RBP13.14□□□□□ -0.31
LTBR-203ENST00000441074 CCDC121Q6ZUS5 278 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 PARP9Q8IXQ6 854 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 TNFRSF25Q93038 417 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 CCDC114Q96M63 670 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 CRAMP1Q96RY5 1269 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 ZSCAN10Q96SZ4 725 aaPredicted RBP13.14□□□□□ -0.31
LTBR-203ENST00000441074 PCDHA13Q9Y5I0 950 aa13.14□□□□□ -0.31
LTBR-203ENST00000441074 MOCS3O95396 460 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 KCNB1Q14721 858 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 CRYMQ14894 314 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 ENAHQ8N8S7 591 aaPredicted RBP13.13□□□□□ -0.31
LTBR-203ENST00000441074 IQCDQ96DY2 449 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 TRIM47Q96LD4 638 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 TUBGCP2Q9BSJ2 902 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 IFIH1Q9BYX4 1025 aaKnown RBP13.13□□□□□ -0.31
LTBR-203ENST00000441074 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
LTBR-203ENST00000441074 CENPHQ9H3R5 247 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 MLXIPQ9HAP2 919 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 RNF14Q9UBS8 474 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 NRXN2Q9P2S2 1712 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 FAM153BP0C7A2 387 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 USP17L8P0C7I0 530 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 HNRNPH3P31942 346 aaKnown RBP13.13□□□□□ -0.31
LTBR-203ENST00000441074 CARSP49589 748 aaKnown RBP13.13□□□□□ -0.31
LTBR-203ENST00000441074 GTF2IP78347 998 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 SEMA3FQ13275 785 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 ITGB3BPQ13352 177 aaPredicted RBP13.13□□□□□ -0.31
LTBR-203ENST00000441074 FAM153CQ494X1 144 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 MFSD14BQ5SR56 506 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
LTBR-203ENST00000441074 KRT26Q7Z3Y9 468 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 ARFGAP2Q8N6H7 521 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 SH3RF3Q8TEJ3 882 aaPredicted RBP13.13□□□□□ -0.31
LTBR-203ENST00000441074 RBM12Q9NTZ6 932 aaKnown RBP13.13□□□□□ -0.31
LTBR-203ENST00000441074 FAM153AQ9UHL3 310 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 NFU1Q9UMS0 254 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 ATP6V0A2Q9Y487 856 aa13.13□□□□□ -0.31
LTBR-203ENST00000441074 E7EVH7 732 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 PSMA7O14818 248 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 NMT2O60551 498 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 LCA5LO95447 670 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 GLI1P08151 1106 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 ERCC3P19447 782 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 PDE6BP35913 854 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 TTI2Q6NXR4 508 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 TMTC3Q6ZXV5 915 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 C2CD5Q86YS7 1000 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 TEX11Q8IYF3 940 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 FUKQ8N0W3 1084 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 CYFIP2Q96F07 1278 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 DCP1AQ9NPI6 582 aaPredicted RBP13.12□□□□□ -0.31
LTBR-203ENST00000441074 SMARCAL1Q9NZC9 954 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 DDX20Q9UHI6 824 aaKnown RBP13.12□□□□□ -0.31
LTBR-203ENST00000441074 MYH13Q9UKX3 1938 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 PPP1R12AO14974 1030 aaPredicted RBP13.12□□□□□ -0.31
LTBR-203ENST00000441074 NPR1P16066 1061 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 ATP2B4P23634 1241 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 CXCR5P32302 372 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 KLK7P49862 253 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 IL17AQ16552 155 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 CFAP221Q4G0U5 840 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 CYB5D1Q6P9G0 228 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 WHAMMQ8TF30 809 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 TBC1D22AQ8WUA7 517 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 SGSM3Q96HU1 749 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 ERGIC2Q96RQ1 377 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 POLD4Q9HCU8 107 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 EHD2Q9NZN4 543 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 PLAGL2Q9UPG8 496 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 CD2APQ9Y5K6 639 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 C10orf71Q711Q0 1435 aa13.12□□□□□ -0.31
LTBR-203ENST00000441074 FGRP09769 529 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 EZRP15311 586 aaKnown RBP13.11□□□□□ -0.31
LTBR-203ENST00000441074 FAM47AQ5JRC9 791 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 ARL6IP4Q66PJ3 421 aaKnown RBP13.11□□□□□ -0.31
LTBR-203ENST00000441074 DPP8Q6V1X1 898 aaPredicted RBP13.11□□□□□ -0.31
LTBR-203ENST00000441074 TAX1BP1Q86VP1 789 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 FAM228AQ86W67 206 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 SP8Q8IXZ3 490 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
LTBR-203ENST00000441074 FAXDC2Q96IV6 333 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 PCMTD1Q96MG8 357 aaPredicted RBP13.11□□□□□ -0.31
LTBR-203ENST00000441074 DBNDD1Q9H9R9 158 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 V9GY48 417 aaPredicted RBP13.11□□□□□ -0.31
LTBR-203ENST00000441074 CNTNAP5Q8WYK1 1306 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 GMNCA6NCL1 334 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 H0YIN7 160 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 PJA2O43164 708 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
LTBR-203ENST00000441074 LONP1P36776 959 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms