RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 RIOX2Q8IUF8 465 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 SAMD3Q8N6K7 520 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 POTEB3A0JP26 581 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 GTPBP6O43824 516 aaPredicted RBP21.45■■□□□ 1.02
SNX17-203ENST00000440760 OSBPP22059 807 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 CCT6AP40227 531 aaKnown RBP21.45■■□□□ 1.02
SNX17-203ENST00000440760 SETQ01105 290 aaPredicted RBP21.45■■□□□ 1.02
SNX17-203ENST00000440760 IQCB1Q15051 598 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 LRCH2Q5VUJ6 765 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 POTEBQ6S5H4 581 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 BRI3BPQ8WY22 251 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 MOV10L1Q9BXT6 1211 aaKnown RBP21.45■■□□□ 1.02
SNX17-203ENST00000440760 BLOC1S4Q9NUP1 217 aa21.45■■□□□ 1.02
SNX17-203ENST00000440760 CHMP2AO43633 222 aa21.44■■□□□ 1.02
SNX17-203ENST00000440760 SMC2O95347 1197 aa21.44■■□□□ 1.02
SNX17-203ENST00000440760 PABPC4Q13310 644 aaKnown RBP eCLIP21.44■■□□□ 1.029e-12■■■■□ 23.3
SNX17-203ENST00000440760 TMEM119Q4V9L6 283 aa21.44■■□□□ 1.02
SNX17-203ENST00000440760 AOPEPQ8N6M6 819 aa21.44■■□□□ 1.02
SNX17-203ENST00000440760 CHST13Q8NET6 341 aa21.44■■□□□ 1.02
SNX17-203ENST00000440760 SLC5A5Q92911 643 aa21.44■■□□□ 1.02
SNX17-203ENST00000440760 ZNF577Q9BSK1 485 aa21.44■■□□□ 1.02
SNX17-203ENST00000440760 KBTBD4Q9NVX7 518 aa21.44■■□□□ 1.02
SNX17-203ENST00000440760 RBPJLQ9UBG7 517 aa21.44■■□□□ 1.02
SNX17-203ENST00000440760 RABGAP1Q9Y3P9 1069 aa21.44■■□□□ 1.02
SNX17-203ENST00000440760 MED24O75448 989 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 HUNKP57058 714 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 MORC3Q14149 939 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 SPRYD7Q5W111 196 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 DHX40Q8IX18 779 aaKnown RBP21.43■■□□□ 1.02
SNX17-203ENST00000440760 UBIAD1Q9Y5Z9 338 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 BTBD19C9JJ37 291 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 EML1O00423 815 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 PSMD10O75832 226 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 CETPP11597 493 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 GTF2A2P52657 109 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 MCM6Q14566 821 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 ANKRD35Q8N283 1001 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 KCNH7Q9NS40 1196 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 KIAA1217Q5T5P2 1943 aa21.43■■□□□ 1.02
SNX17-203ENST00000440760 DDX39AO00148 427 aaKnown RBP21.42■■□□□ 1.02
SNX17-203ENST00000440760 AP5Z1O43299 807 aa21.42■■□□□ 1.02
SNX17-203ENST00000440760 ERCC3P19447 782 aa21.42■■□□□ 1.02
SNX17-203ENST00000440760 PLCB2Q00722 1185 aa21.42■■□□□ 1.02
SNX17-203ENST00000440760 CNTN2Q02246 1040 aa21.42■■□□□ 1.02
SNX17-203ENST00000440760 Q3C1V9 767 aa21.42■■□□□ 1.02
SNX17-203ENST00000440760 SMYD4Q8IYR2 804 aaPredicted RBP21.42■■□□□ 1.02
SNX17-203ENST00000440760 CUEDC2Q9H467 287 aa21.42■■□□□ 1.02
SNX17-203ENST00000440760 ASTN1O14525 1302 aa21.42■■□□□ 1.02
SNX17-203ENST00000440760 POTEFA5A3E0 1075 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 PDHXO00330 501 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 IPO5O00410 1097 aaKnown RBP21.41■■□□□ 1.02
SNX17-203ENST00000440760 GAS7O60861 476 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 UVSSAQ2YD98 709 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 POTEGQ6S5H5 508 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 LARP4BQ92615 738 aaKnown RBP21.41■■□□□ 1.02
SNX17-203ENST00000440760 TESPA1A2RU30 521 aaPredicted RBP21.41■■□□□ 1.02
SNX17-203ENST00000440760 CAVIN2O95810 425 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 NR3C2P08235 984 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 CYP4A11Q02928 519 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 MTMR1Q13613 665 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 OTOP1Q7RTM1 612 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 RAD54LQ92698 747 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 NAT10Q9H0A0 1025 aaKnown RBP21.41■■□□□ 1.02
SNX17-203ENST00000440760 UNC45AQ9H3U1 944 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 JADE2Q9NQC1 790 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 STK17AQ9UEE5 414 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 KIAA1024Q9UPX6 916 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 KDM3AQ9Y4C1 1321 aa21.41■■□□□ 1.02
SNX17-203ENST00000440760 RPN1P04843 607 aaKnown RBP21.4■■□□□ 1.02
SNX17-203ENST00000440760 ITGB3BPQ13352 177 aaPredicted RBP21.4■■□□□ 1.02
SNX17-203ENST00000440760 HYIQ5T013 277 aa21.4■■□□□ 1.02
SNX17-203ENST00000440760 HAUS3Q68CZ6 603 aa21.4■■□□□ 1.02
SNX17-203ENST00000440760 CATSPER3Q86XQ3 398 aa21.4■■□□□ 1.02
SNX17-203ENST00000440760 FAM43AQ8N2R8 423 aa21.4■■□□□ 1.02
SNX17-203ENST00000440760 NSUN6Q8TEA1 469 aaKnown RBP21.4■■□□□ 1.02
SNX17-203ENST00000440760 SMCR8Q8TEV9 937 aaPredicted RBP21.4■■□□□ 1.02
SNX17-203ENST00000440760 GSDMAQ96QA5 445 aa21.4■■□□□ 1.02
SNX17-203ENST00000440760 DOCK5Q9H7D0 1870 aa21.4■■□□□ 1.02
SNX17-203ENST00000440760 MAGEF1Q9HAY2 307 aa21.4■■□□□ 1.02
SNX17-203ENST00000440760 E9PMD0 336 aa21.39■■□□□ 1.02
SNX17-203ENST00000440760 BCRP11274 1271 aa21.39■■□□□ 1.02
SNX17-203ENST00000440760 CCND2P30279 289 aa21.39■■□□□ 1.02
SNX17-203ENST00000440760 NIPA1Q7RTP0 329 aa21.39■■□□□ 1.02
SNX17-203ENST00000440760 TRIML1Q8N9V2 468 aa21.39■■□□□ 1.02
SNX17-203ENST00000440760 AGO4Q9HCK5 861 aaKnown RBP21.39■■□□□ 1.02
SNX17-203ENST00000440760 FBXO40Q9UH90 709 aa21.39■■□□□ 1.02
SNX17-203ENST00000440760 PNMA3Q9UL41 463 aa21.39■■□□□ 1.02
SNX17-203ENST00000440760 BECN2A8MW95 431 aa21.39■■□□□ 1.01
SNX17-203ENST00000440760 SPATA31C1P0DKV0 1188 aa21.39■■□□□ 1.01
SNX17-203ENST00000440760 ZBTB48P10074 688 aaPredicted RBP21.39■■□□□ 1.01
SNX17-203ENST00000440760 PPP2R5CQ13362 524 aa21.39■■□□□ 1.01
SNX17-203ENST00000440760 ANP32BQ92688 251 aaKnown RBP21.39■■□□□ 1.01
SNX17-203ENST00000440760 EIF2AK1Q9BQI3 630 aaKnown RBP21.39■■□□□ 1.01
SNX17-203ENST00000440760 TEKT3Q9BXF9 490 aa21.39■■□□□ 1.01
SNX17-203ENST00000440760 TRIM9Q9C026 710 aa21.39■■□□□ 1.01
SNX17-203ENST00000440760 RGL1Q9NZL6 768 aa21.39■■□□□ 1.01
SNX17-203ENST00000440760 LRRC37A2A6NM11 1700 aa21.39■■□□□ 1.01
SNX17-203ENST00000440760 PFASO15067 1338 aa21.38■■□□□ 1.01
SNX17-203ENST00000440760 ERVK-9P63128 1117 aa21.38■■□□□ 1.01
SNX17-203ENST00000440760 ERVK-24P63145 666 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms