RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 NUDT12Q9BQG2 462 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 ZNF341Q9BYN7 854 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 THAP9Q9H5L6 903 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 CTNND2Q9UQB3 1225 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 LCTP09848 1927 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 FAM86B1E9PN63 330 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 H7C1D1 291 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 FAM86B2P0C5J1 330 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 FDX1P10109 184 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 PSMD2Q13200 908 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 TTI2Q6NXR4 508 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 TMEM139Q8IV31 216 aa14.73□□□□□ -0.05
ACTN4-204ENST00000440400 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.73□□□□□ -0.05
ACTN4-204ENST00000440400 POTEMA6NI47 508 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 MUTP22033 750 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 SNAP25P60880 206 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 KRT79Q5XKE5 535 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 DCAF15Q66K64 600 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 IRF2BP1Q8IU81 584 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 SMYD4Q8IYR2 804 aaPredicted RBP14.72□□□□□ -0.05
ACTN4-204ENST00000440400 SCYL3Q8IZE3 742 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 SPICE1Q8N0Z3 855 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 NELFBQ8WX92 580 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 CLEC4DQ8WXI8 215 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 TSPYL1Q9H0U9 437 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 PCDHA12Q9UN75 941 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 ADAMTS5Q9UNA0 930 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 GDAQ9Y2T3 454 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 MYMKA6NI61 221 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 LMNB1P20700 586 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 ARID5BQ14865 1188 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 SV2BQ7L1I2 683 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 NIPA1Q7RTP0 329 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 SAMD7Q7Z3H4 446 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 SLC5A5Q92911 643 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 DNAJC19Q96DA6 116 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 SLC38A10Q9HBR0 1119 aa14.72□□□□□ -0.05
ACTN4-204ENST00000440400 SERPINC1P01008 464 aa14.71□□□□□ -0.05
ACTN4-204ENST00000440400 INPP5BP32019 993 aa14.71□□□□□ -0.05
ACTN4-204ENST00000440400 GTF2A1P52655 376 aaPredicted RBP14.71□□□□□ -0.05
ACTN4-204ENST00000440400 SPAG1Q07617 926 aa14.71□□□□□ -0.05
ACTN4-204ENST00000440400 SYT10Q6XYQ8 523 aa14.71□□□□□ -0.05
ACTN4-204ENST00000440400 TMC6Q7Z403 805 aa14.71□□□□□ -0.05
ACTN4-204ENST00000440400 KCNK18Q7Z418 384 aa14.71□□□□□ -0.05
ACTN4-204ENST00000440400 SPDYE3A6NKU9 549 aa14.71□□□□□ -0.05
ACTN4-204ENST00000440400 SNX29Q8TEQ0 813 aa14.71□□□□□ -0.05
ACTN4-204ENST00000440400 SLF1Q9BQI6 1058 aa14.71□□□□□ -0.05
ACTN4-204ENST00000440400 POLR3CQ9BUI4 534 aaPredicted RBP14.71□□□□□ -0.05
ACTN4-204ENST00000440400 ZNF446Q9NWS9 450 aa14.71□□□□□ -0.05
ACTN4-204ENST00000440400 LCMT1Q9UIC8 334 aa14.71□□□□□ -0.05
ACTN4-204ENST00000440400 LRRC37A2A6NM11 1700 aa14.71□□□□□ -0.06
ACTN4-204ENST00000440400 USP14P54578 494 aa14.71□□□□□ -0.06
ACTN4-204ENST00000440400 PPP2R5CQ13362 524 aa14.71□□□□□ -0.06
ACTN4-204ENST00000440400 FCHSD1Q86WN1 690 aa14.71□□□□□ -0.06
ACTN4-204ENST00000440400 KIAA0895Q8NCT3 520 aa14.71□□□□□ -0.06
ACTN4-204ENST00000440400 DUSP9Q99956 384 aaKnown RBP14.71□□□□□ -0.06
ACTN4-204ENST00000440400 EMILIN3Q9NT22 766 aa14.71□□□□□ -0.06
ACTN4-204ENST00000440400 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.06
ACTN4-204ENST00000440400 PCDHA2Q9Y5H9 948 aa14.71□□□□□ -0.06
ACTN4-204ENST00000440400 GCOM1H8Y6P7 765 aaPredicted RBP14.7□□□□□ -0.06
ACTN4-204ENST00000440400 MSH4O15457 936 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 POLR2MP0CAP2 368 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 BCRP11274 1271 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 SYCP1Q15431 976 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 USH1GQ495M9 461 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 TCP11X2Q5H9J9 407 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 SPECC1LQ69YQ0 1117 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 LDHDQ86WU2 507 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 ZC3H3Q8IXZ2 948 aaKnown RBP14.7□□□□□ -0.06
ACTN4-204ENST00000440400 PRPF38AQ8NAV1 312 aaKnown RBP14.7□□□□□ -0.06
ACTN4-204ENST00000440400 REPS2Q8NFH8 660 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 SPATA31C1P0DKV0 1188 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 EEF1GP26641 437 aaKnown RBP14.7□□□□□ -0.06
ACTN4-204ENST00000440400 RPA1P27694 616 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 SLC12A3P55017 1021 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 CENPPQ6IPU0 288 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 RASSF4Q9H2L5 321 aa14.7□□□□□ -0.06
ACTN4-204ENST00000440400 CCNE1P24864 410 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 TBC1D10BQ4KMP7 808 aaPredicted RBP14.69□□□□□ -0.06
ACTN4-204ENST00000440400 NBPF12Q5TAG4 269 aaPredicted RBP14.69□□□□□ -0.06
ACTN4-204ENST00000440400 CEP135Q66GS9 1140 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 TRPM4Q8TD43 1214 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 EHMT1Q9H9B1 1298 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 PPP1R9AQ9ULJ8 1098 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 PSDA5PKW4 1024 aaPredicted RBP14.69□□□□□ -0.06
ACTN4-204ENST00000440400 PSMD10O75832 226 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 PMS1P54277 932 aaKnown RBP14.69□□□□□ -0.06
ACTN4-204ENST00000440400 MCM6Q14566 821 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 NYAP1Q6ZVC0 841 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 ATP2A1O14983 1001 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 OAZ1P54368 228 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 SETQ01105 290 aaPredicted RBP14.69□□□□□ -0.06
ACTN4-204ENST00000440400 HAUS3Q68CZ6 603 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 GUF1Q8N442 669 aaKnown RBP14.69□□□□□ -0.06
ACTN4-204ENST00000440400 CCDC47Q96A33 483 aaKnown RBP14.69□□□□□ -0.06
ACTN4-204ENST00000440400 EXOC1Q9NV70 894 aa14.69□□□□□ -0.06
ACTN4-204ENST00000440400 BICDL2A1A5D9 508 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 USP27XA6NNY8 438 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 SKILP12757 684 aa14.68□□□□□ -0.06
ACTN4-204ENST00000440400 TAL1P17542 331 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms