RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 PLA2G1BP04054 148 aaKnown RBP5.13□□□□□ -1.59
VPS41-207ENST00000439468 SCG5P05408 212 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 LCP1P13796 627 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 HSD3B2P26439 372 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 ACBD5Q5T8D3 534 aaPredicted RBP5.13□□□□□ -1.59
VPS41-207ENST00000439468 ETV3LQ6ZN32 361 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 USP53Q70EK8 1073 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 B3GNT8Q7Z7M8 397 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 ZDHHC14Q8IZN3 488 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 ADGRG2Q8IZP9 1017 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 LINC01356Q8N9X3 169 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 SYT8Q8NBV8 401 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 SEC14L1Q92503 715 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 KISS1RQ969F8 398 aaPredicted RBP5.13□□□□□ -1.59
VPS41-207ENST00000439468 OSBP2Q969R2 916 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 KCNC2Q96PR1 638 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 CDC6Q99741 560 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 CLDND1Q9NY35 253 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 CD2APQ9Y5K6 639 aa5.13□□□□□ -1.59
VPS41-207ENST00000439468 TRBV23-1A0A0A0MS06 115 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 A0A1B0GTL3 188 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 ARNTLO00327 626 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 FFAR3O14843 346 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 SGSM2O43147 1006 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 DLX3O60479 287 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 CYP2C8P10632 490 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 CACNB2Q08289 660 aaPredicted RBP5.12□□□□□ -1.59
VPS41-207ENST00000439468 LSAMPQ13449 338 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 MROH9Q5TGP6 573 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 NSMFQ6X4W1 530 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 MILR1Q7Z6M3 343 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 NLRP10Q86W26 655 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 HOMER1Q86YM7 354 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 KREMEN2Q8NCW0 462 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 RCBTB1Q8NDN9 531 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 ZSWIM2Q8NEG5 633 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 FNIP1Q8TF40 1166 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 ZBTB8AQ96BR9 441 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 CLUHP3Q96NS8 147 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 DHRS4Q9BTZ2 278 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 FBXL7Q9UJT9 491 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 PALD1Q9ULE6 856 aa5.12□□□□□ -1.59
VPS41-207ENST00000439468 OTOL1A6NHN0 477 aaPredicted RBP5.11□□□□□ -1.59
VPS41-207ENST00000439468 RAPGEF3O95398 923 aa5.11□□□□□ -1.59
VPS41-207ENST00000439468 PABPC1P11940 636 aaKnown RBP5.11□□□□□ -1.59
VPS41-207ENST00000439468 KCNC1P48547 511 aa5.11□□□□□ -1.59
VPS41-207ENST00000439468 GYS2P54840 703 aa5.11□□□□□ -1.59
VPS41-207ENST00000439468 SMAD4Q13485 552 aaKnown RBP5.11□□□□□ -1.59
VPS41-207ENST00000439468 PLEKHG4Q58EX7 1191 aa5.11□□□□□ -1.59
VPS41-207ENST00000439468 DENND5AQ6IQ26 1287 aa5.11□□□□□ -1.59
VPS41-207ENST00000439468 CD300LDQ6UXZ3 194 aa5.11□□□□□ -1.59
VPS41-207ENST00000439468 C16orf86Q6ZW13 317 aa5.11□□□□□ -1.59
VPS41-207ENST00000439468 ZC3H18Q86VM9 953 aaKnown RBP5.11□□□□□ -1.59
VPS41-207ENST00000439468 USP40Q9NVE5 1235 aa5.11□□□□□ -1.59
VPS41-207ENST00000439468 RAPGEFL1Q9UHV5 662 aa5.11□□□□□ -1.59
VPS41-207ENST00000439468 MRPS23Q9Y3D9 190 aaKnown RBP5.11□□□□□ -1.59
VPS41-207ENST00000439468 ANKRD62A6NC57 917 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 H7BY64 318 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 SLC6A11P48066 632 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 MAP4K2Q12851 820 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 NFIXQ14938 502 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 CHRNA2Q15822 529 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 NTRK3Q16288 839 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 VWA3BQ502W6 1294 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 SLC35F1Q5T1Q4 408 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 KIAA0907Q7Z7F0 614 aaPredicted RBP5.1□□□□□ -1.59
VPS41-207ENST00000439468 RIOX2Q8IUF8 465 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 SCUBE1Q8IWY4 988 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 ZNF526Q8TF50 670 aaPredicted RBP5.1□□□□□ -1.59
VPS41-207ENST00000439468 CPA5Q8WXQ8 436 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 NOX5Q96PH1 765 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 SPATA25Q9BR10 227 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 LUC7LQ9NQ29 371 aaKnown RBP5.1□□□□□ -1.59
VPS41-207ENST00000439468 X6R8D5 127 aa5.1□□□□□ -1.59
VPS41-207ENST00000439468 A0A0G2JLL6 359 aaPredicted RBP5.09□□□□□ -1.59
VPS41-207ENST00000439468 DGKIO75912 1065 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 C8BP07358 591 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 C6orf222P0C671 652 aaPredicted RBP5.09□□□□□ -1.59
VPS41-207ENST00000439468 FGFR1P11362 822 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 STAT5AP42229 794 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 SLURP1P55000 103 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 LONRF2Q1L5Z9 754 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 DALRD3Q5D0E6 543 aaKnown RBP5.09□□□□□ -1.59
VPS41-207ENST00000439468 STEAP3Q658P3 488 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 LIPIQ6XZB0 460 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 TTLL7Q6ZT98 887 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 SAPCD2Q86UD0 394 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 STK32CQ86UX6 486 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 DHX37Q8IY37 1157 aaKnown RBP5.09□□□□□ -1.59
VPS41-207ENST00000439468 FAM26EQ8N5C1 309 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 TP53I13Q8NBR0 393 aaPredicted RBP5.09□□□□□ -1.59
VPS41-207ENST00000439468 RELTQ969Z4 430 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 C1orf159Q96HA4 380 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 PHF20Q9BVI0 1012 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 XYLT2Q9H1B5 865 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 ADAM7Q9H2U9 754 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 EPB41L1Q9H4G0 881 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 TRAF6Q9Y4K3 522 aa5.09□□□□□ -1.59
VPS41-207ENST00000439468 PCDHB4Q9Y5E5 795 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms