RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CLASRPQ8N2M8 674 aaKnown RBP13.22□□□□□ -0.29
CSTF3-203ENST00000438862 DHX38Q92620 1227 aaKnown RBP13.22□□□□□ -0.29
CSTF3-203ENST00000438862 LMAN2LQ9H0V9 348 aa13.22□□□□□ -0.29
CSTF3-203ENST00000438862 C1orf115Q9H7X2 142 aa13.22□□□□□ -0.29
CSTF3-203ENST00000438862 ALG13Q9NP73 1137 aaKnown RBP13.22□□□□□ -0.29
CSTF3-203ENST00000438862 CCPG1Q9ULG6 757 aa13.22□□□□□ -0.29
CSTF3-203ENST00000438862 EXOC6BQ9Y2D4 811 aa13.22□□□□□ -0.29
CSTF3-203ENST00000438862 KMT2EQ8IZD2 1858 aa13.22□□□□□ -0.29
CSTF3-203ENST00000438862 MICAL3Q7RTP6 2002 aa13.22□□□□□ -0.29
CSTF3-203ENST00000438862 EMSYQ7Z589 1322 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 MINDY4BA8MYZ0 360 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 B4DLN1 442 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 ICAM1P05362 532 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 TXNP10599 105 aaKnown RBP13.21□□□□□ -0.29
CSTF3-203ENST00000438862 MRPL12P52815 198 aaKnown RBP13.21□□□□□ -0.29
CSTF3-203ENST00000438862 PDE4DQ08499 809 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 PTK7Q13308 1070 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 RCSD1Q6JBY9 416 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 FBXO11Q86XK2 927 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 MYOCDQ8IZQ8 938 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 STK11IPQ8N1F8 1099 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 RHPN1Q8TCX5 695 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 IL1RAPL2Q9NP60 686 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 RYDENQ9NUL5 291 aaKnown RBP13.21□□□□□ -0.29
CSTF3-203ENST00000438862 GTF2IRD1Q9UHL9 959 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 PRR12Q9ULL5 1215 aa13.21□□□□□ -0.29
CSTF3-203ENST00000438862 RB1P06400 928 aa13.2□□□□□ -0.3
CSTF3-203ENST00000438862 IFIT2P09913 472 aaKnown RBP13.2□□□□□ -0.3
CSTF3-203ENST00000438862 CASTP20810 708 aaKnown RBP13.2□□□□□ -0.3
CSTF3-203ENST00000438862 AVPR2P30518 371 aa13.2□□□□□ -0.3
CSTF3-203ENST00000438862 PDE4BQ07343 736 aa13.2□□□□□ -0.3
CSTF3-203ENST00000438862 DLX2Q07687 328 aaPredicted RBP13.2□□□□□ -0.3
CSTF3-203ENST00000438862 SIGLEC14Q08ET2 396 aa13.2□□□□□ -0.3
CSTF3-203ENST00000438862 CLUL1Q15846 466 aa13.2□□□□□ -0.3
CSTF3-203ENST00000438862 NEDD1Q8NHV4 660 aa13.2□□□□□ -0.3
CSTF3-203ENST00000438862 COPS5Q92905 334 aa13.2□□□□□ -0.3
CSTF3-203ENST00000438862 TOP1MTQ969P6 601 aa13.2□□□□□ -0.3
CSTF3-203ENST00000438862 YME1L1Q96TA2 773 aa13.2□□□□□ -0.3
CSTF3-203ENST00000438862 PUS7LQ9H0K6 701 aaKnown RBP13.2□□□□□ -0.3
CSTF3-203ENST00000438862 CD207Q9UJ71 328 aa13.2□□□□□ -0.3
CSTF3-203ENST00000438862 RALGAPA2Q2PPJ7 1873 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 NLRC5Q86WI3 1866 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 PTPDC1A2A3K4 754 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 GSG1L2A8MUP6 293 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 MCCP23508 829 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 HYAL1Q12794 435 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 ZNF618Q5T7W0 954 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 ZKSCAN2Q63HK3 967 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 TRAF7Q6Q0C0 670 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 C7orf31Q8N865 590 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 DBF4BQ8NFT6 615 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 DNERQ8NFT8 737 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 STRBPQ96SI9 672 aaKnown RBP13.19□□□□□ -0.3
CSTF3-203ENST00000438862 MYH7P12883 1935 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 PLXNA3P51805 1871 aa13.19□□□□□ -0.3
CSTF3-203ENST00000438862 CACNA1HO95180 2353 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 LOC730098B7Z3J9 87 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 C5orf67F2Z3F1 127 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 EYA4O95677 639 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 MMP3P08254 477 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 ATP5JP18859 108 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 EDNRBP24530 442 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 PDE4AP27815 886 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 ID4P47928 161 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 SNAP25P60880 206 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 ADAM15Q13444 863 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 MBTPS1Q14703 1052 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
CSTF3-203ENST00000438862 KCTD1Q719H9 257 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 AFG1LQ8WV93 481 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 KAT2BQ92831 832 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 HAUS7Q99871 368 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 FSD1Q9BTV5 496 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 KATNAL1Q9BW62 490 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 HDAC6Q9UBN7 1215 aa13.18□□□□□ -0.3
CSTF3-203ENST00000438862 MYO7AQ13402 2215 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 H0Y858 1186 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 PRDM1O75626 825 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 CALML3P27482 149 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 VCPP55072 806 aaKnown RBP13.17□□□□□ -0.3
CSTF3-203ENST00000438862 DGKDQ16760 1214 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
CSTF3-203ENST00000438862 PLEKHG4Q58EX7 1191 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 CEP85Q6P2H3 762 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 RNF207Q6ZRF8 634 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 ASCL5Q7RTU5 278 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 C11orf84Q9BUA3 381 aaPredicted RBP13.17□□□□□ -0.3
CSTF3-203ENST00000438862 TLR9Q9NR96 1032 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 PNMA2Q9UL42 364 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 RWDD3Q9Y3V2 267 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 PLIN4Q96Q06 1357 aa13.17□□□□□ -0.3
CSTF3-203ENST00000438862 PRR23AA6NEV1 266 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 RSPH10B2B2RC85 870 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 NFIBO00712 420 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 TBX10O75333 385 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms