RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 RGPD5Q99666 1765 aa12.76□□□□□ -0.37
TRAPPC9-202ENST00000438773 POTEB2H3BUK9 544 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 STX10O60499 249 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 MCM3P25205 808 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 PTPAQ15257 358 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 VWA3BQ502W6 1294 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 GLG1Q92896 1179 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 JAKMIP2Q96AA8 810 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 PSMB7Q99436 277 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 KCPQ6ZWJ8 1503 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 IQCA1LA6NCM1 817 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 KLHL30Q0D2K2 578 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 FAM102BQ5T8I3 360 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 DDX12PQ92771 950 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 TMEM39BQ9GZU3 492 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 RIC8AQ9NPQ8 531 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 CNOT7Q9UIV1 285 aaKnown RBP12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 ANKRD65E5RJM6 399 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 ZEB2O60315 1214 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 PNMA6AP0CW24 399 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 H2AFXP16104 143 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 ETF1P62495 437 aaKnown RBP12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 VSTM4Q8IW00 320 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 MICALL2Q8IY33 904 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 GOLGA1Q92805 767 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 VTI1AQ96AJ9 217 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 ZMYND12Q9H0C1 365 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 ZCCHC17Q9NP64 241 aaKnown RBP12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 PPP2R2CQ9Y2T4 447 aa12.75□□□□□ -0.37
TRAPPC9-202ENST00000438773 NR2F2P24468 414 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 IRX5P78411 483 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 STRN3Q13033 797 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 ASIC2Q16515 512 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 L2HGDHQ9H9P8 463 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 JMJD4Q9H9V9 463 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 K7ENM7 598 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 PRCPP42785 496 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 PRPF38AQ8NAV1 312 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 FAM163AQ96GL9 167 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 TMEM60Q9H2L4 133 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 IL17RBQ9NRM6 502 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 FAM53CQ9NYF3 392 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 PLA2G4AP47712 749 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 RNASE9P60153 205 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 NCAPHQ15003 741 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 NACC1Q96RE7 527 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 NAPGQ99747 312 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 LSM14BQ9BX40 385 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 MLXIPQ9HAP2 919 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 FEM1BQ9UK73 627 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 SHTN1A0MZ66 631 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 TOB1P50616 345 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 GTF2A1P52655 376 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 RBL2Q08999 1139 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 CTTNQ14247 550 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 CRY2Q49AN0 593 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 SFMBT2Q5VUG0 894 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 BPIFA3Q9BQP9 254 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 KCNQ5Q9NR82 932 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 GINS2Q9Y248 185 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 PHLPP1O60346 1717 aa12.74□□□□□ -0.37
TRAPPC9-202ENST00000438773 POTEB3A0JP26 581 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 TRIM49BA6NDI0 452 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 DDTLA6NHG4 134 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 POTECB2RU33 542 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 KRT31Q15323 416 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 PKN1Q16512 942 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 POTEBQ6S5H4 581 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 CTNNBL1Q8WYA6 563 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 EMILIN3Q9NT22 766 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 E9PMD0 336 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 DESP17661 470 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 PRPHP41219 470 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 ORC2Q13416 577 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 ARHGEF6Q15052 776 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 PIGOQ8TEQ8 1089 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 TSGA10Q9BZW7 698 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 IWS1Q96ST2 819 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 PRM3Q9NNZ6 103 aa12.73□□□□□ -0.37
TRAPPC9-202ENST00000438773 KDM3BQ7LBC6 1761 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 GYS2P54840 703 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 UNC13DQ70J99 1090 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 LMBR1Q8WVP7 490 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 FAM20AQ96MK3 541 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 IFIH1Q9BYX4 1025 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 POLD4Q9HCU8 107 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.72□□□□□ -0.376e-7■■■■■ 241.2
TRAPPC9-202ENST00000438773 SMARCA1P28370 1054 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 EVX2Q03828 476 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 RNF207Q6ZRF8 634 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 C15orf52Q6ZUT6 534 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 EPN1Q9Y6I3 576 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 TNFAIP3P21580 790 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 USP11P51784 963 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 POLR2FP61218 127 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 KIF22Q14807 665 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms