RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 ZCCHC4Q9H5U6 513 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 HSPBP1Q9NZL4 362 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 PALD1Q9ULE6 856 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 NCANO14594 1321 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 TRAV20A0A0B4J274 112 aa5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 A0A0G2JLL6 359 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 OTOL1A6NHN0 477 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 PRODHO43272 600 aa5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 SASH1O94885 1247 aa5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 CHRNA2Q15822 529 aa5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 CR1LQ2VPA4 569 aa5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 YOD1Q5VVQ6 348 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 STYK1Q6J9G0 422 aa5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 LIPIQ6XZB0 460 aa5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 FAM126BQ8IXS8 530 aa5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 GORASP1Q9BQQ3 440 aa5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 CLDND1Q9NY35 253 aa5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 COA3Q9Y2R0 106 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P12-201ENST00000438745 TCRBV5S2A0A599 114 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 U2SURPO15042 1029 aaKnown RBP5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 LONRF2Q1L5Z9 754 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 HABP4Q5JVS0 413 aaKnown RBP5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 CYP4F22Q6NT55 531 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 KCNT2Q6UVM3 1135 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 LBX2Q6XYB7 198 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 USP53Q70EK8 1073 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 SCUBE1Q8IWY4 988 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 SP8Q8IXZ3 490 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 FAM26EQ8N5C1 309 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 ZBTB38Q8NAP3 1195 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 DDX11Q96FC9 970 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 CHAMP1Q96JM3 812 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 SYT3Q9BQG1 590 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 C11orf84Q9BUA3 381 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 PHF20Q9BVI0 1012 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 SMOC1Q9H4F8 434 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 EPB41L1Q9H4G0 881 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 SLC6A20Q9NP91 592 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 NGRNQ9NPE2 291 aaKnown RBP5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 RTEL1Q9NZ71 1219 aa5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 PPP1R1BQ9UD71 204 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P12-201ENST00000438745 A0A1B0GTL3 188 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 DGKIO75912 1065 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 CYP2C8P10632 490 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 GTF2F1P35269 517 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 KCNC1P48547 511 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 CTSWP56202 376 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 PRR31Q5SQ13 230 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 FOXB2Q5VYV0 432 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 STEAP3Q658P3 488 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 ADGRG2Q8IZP9 1017 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 CARFQ8N187 725 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 JMYQ8N9B5 988 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 KYQ8NBH2 561 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 ARRDC4Q8NCT1 418 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 FEZF2Q8TBJ5 459 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 PHOSPHO1Q8TCT1 267 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 MKL1Q969V6 931 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 ASXL2Q76L83 1435 aa5.13□□□□□ -1.59
HMGB3P12-201ENST00000438745 LRG1P02750 347 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 GPR85P60893 370 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 IFRD2Q12894 506 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 RASA3Q14644 834 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 ZFYVE27Q5T4F4 411 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 CD300LDQ6UXZ3 194 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 FRMD5Q7Z6J6 570 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 IFNL3Q8IZI9 196 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 SYT8Q8NBV8 401 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 ZBTB8AQ96BR9 441 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 JAM3Q9BX67 310 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 DTLQ9NZJ0 730 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 PPARGC1AQ9UBK2 798 aaKnown RBP5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 ASH2LQ9UBL3 628 aa5.12□□□□□ -1.59
HMGB3P12-201ENST00000438745 BLACEA4D250 179 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 FAM221BA6H8Z2 402 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 WNT9AO14904 365 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 NOBOXO60393 691 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 DIAPH1O60610 1272 aaKnown RBP5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 C6orf222P0C671 652 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 RPL13P26373 211 aaKnown RBP5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 THBS2P35442 1172 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 SARSP49591 514 aaKnown RBP5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 ITGA1P56199 1179 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 KIZQ2M2Z5 673 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 MTERF2Q49AM1 385 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 SOGA3Q5TF21 947 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 TTLL7Q6ZT98 887 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 DPH6Q7L8W6 267 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 OTOP3Q7RTS5 596 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 ZC3H18Q86VM9 953 aaKnown RBP5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 TTLL11Q8NHH1 800 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 CXorf38Q8TB03 319 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 CLEC4DQ8WXI8 215 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 KISS1RQ969F8 398 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 RELTQ969Z4 430 aa5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 TOE1Q96GM8 510 aaKnown RBP5.11□□□□□ -1.59
HMGB3P12-201ENST00000438745 USP35Q9P2H5 1018 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms