RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 C7orf61Q8IZ16 206 aa18.71■□□□□ 0.59
CTSD-205ENST00000438213 EMID1Q96A84 441 aaPredicted RBP18.71■□□□□ 0.59
CTSD-205ENST00000438213 GPRASP2Q96D09 838 aa18.71■□□□□ 0.59
CTSD-205ENST00000438213 MLXIPQ9HAP2 919 aa18.71■□□□□ 0.59
CTSD-205ENST00000438213 SH2B1Q9NRF2 756 aaPredicted RBP18.71■□□□□ 0.59
CTSD-205ENST00000438213 TMEM260Q9NX78 707 aa18.71■□□□□ 0.59
CTSD-205ENST00000438213 ATP11BQ9Y2G3 1177 aa18.71■□□□□ 0.59
CTSD-205ENST00000438213 LRRC37A2A6NM11 1700 aa18.71■□□□□ 0.59
CTSD-205ENST00000438213 MKI67P46013 3256 aaKnown RBP18.71■□□□□ 0.59
CTSD-205ENST00000438213 A0A0U1RQG5 324 aaPredicted RBP18.7■□□□□ 0.58
CTSD-205ENST00000438213 LARGE1O95461 756 aa18.7■□□□□ 0.58
CTSD-205ENST00000438213 CTDNEP1O95476 244 aa18.7■□□□□ 0.58
CTSD-205ENST00000438213 MYL3P08590 195 aa18.7■□□□□ 0.58
CTSD-205ENST00000438213 ZNF76P36508 570 aa18.7■□□□□ 0.58
CTSD-205ENST00000438213 ARHGAP1Q07960 439 aa18.7■□□□□ 0.58
CTSD-205ENST00000438213 PRPF38BQ5VTL8 546 aaKnown RBP18.7■□□□□ 0.58
CTSD-205ENST00000438213 MYSM1Q5VVJ2 828 aa18.7■□□□□ 0.58
CTSD-205ENST00000438213 GIMAP8Q8ND71 665 aaPredicted RBP18.7■□□□□ 0.58
CTSD-205ENST00000438213 AFG1LQ8WV93 481 aa18.7■□□□□ 0.58
CTSD-205ENST00000438213 SENP7Q9BQF6 1050 aa18.7■□□□□ 0.58
CTSD-205ENST00000438213 UBIAD1Q9Y5Z9 338 aa18.7■□□□□ 0.58
CTSD-205ENST00000438213 KIAA1217Q5T5P2 1943 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 DCDC2CA8MYV0 355 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 H0YGN5 161 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 TNRC18O15417 2968 aaPredicted RBP18.69■□□□□ 0.58
CTSD-205ENST00000438213 GGPS1O95749 300 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 SREBF1P36956 1147 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 SP2Q02086 613 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 DGKDQ16760 1214 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 PPTC7Q8NI37 304 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 PGBD1Q96JS3 809 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 TOX2Q96NM4 488 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 MXRA8Q9BRK3 442 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 MTG1Q9BT17 334 aaPredicted RBP18.69■□□□□ 0.58
CTSD-205ENST00000438213 JADE2Q9NQC1 790 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 PRKAG2Q9UGJ0 569 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 PCDHA4Q9UN74 947 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 MROH7Q68CQ1 1323 aa18.69■□□□□ 0.58
CTSD-205ENST00000438213 ARVCFO00192 962 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 PPFIA4O75335 1185 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 CYP3A4P08684 503 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 ITGB5P18084 799 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 UBA1P22314 1058 aaKnown RBP18.68■□□□□ 0.58
CTSD-205ENST00000438213 ARHGAP4P98171 946 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 PURAQ00577 322 aaKnown RBP18.68■□□□□ 0.58
CTSD-205ENST00000438213 TLE2Q04725 743 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 MTMR1Q13613 665 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 ITGA7Q13683 1181 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 TRIM60Q495X7 471 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 BLIDQ8IZY5 108 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 NSUN7Q8NE18 718 aaKnown RBP18.68■□□□□ 0.58
CTSD-205ENST00000438213 SPATA33Q96N06 139 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 AIFM3Q96NN9 605 aa18.68■□□□□ 0.58
CTSD-205ENST00000438213 LLPHQ9BRT6 129 aaKnown RBP18.68■□□□□ 0.58
CTSD-205ENST00000438213 CEP290O15078 2479 aa18.67■□□□□ 0.58
CTSD-205ENST00000438213 MMP3P08254 477 aa18.67■□□□□ 0.58
CTSD-205ENST00000438213 MCM2P49736 904 aa18.67■□□□□ 0.58
CTSD-205ENST00000438213 CDK7P50613 346 aa18.67■□□□□ 0.58
CTSD-205ENST00000438213 CEP55Q53EZ4 464 aa18.67■□□□□ 0.58
CTSD-205ENST00000438213 ANKRD33Q7Z3H0 272 aa18.67■□□□□ 0.58
CTSD-205ENST00000438213 DAGLBQ8NCG7 672 aa18.67■□□□□ 0.58
CTSD-205ENST00000438213 ALG1Q9BT22 464 aa18.67■□□□□ 0.58
CTSD-205ENST00000438213 NOP56O00567 594 aaKnown RBP18.66■□□□□ 0.58
CTSD-205ENST00000438213 FDPSP14324 419 aaKnown RBP18.66■□□□□ 0.58
CTSD-205ENST00000438213 SEMA3FQ13275 785 aa18.66■□□□□ 0.58
CTSD-205ENST00000438213 METTL7BQ6UX53 244 aa18.66■□□□□ 0.58
CTSD-205ENST00000438213 CYFIP1Q7L576 1253 aa18.66■□□□□ 0.58
CTSD-205ENST00000438213 NIPA1Q7RTP0 329 aa18.66■□□□□ 0.58
CTSD-205ENST00000438213 CCDC83Q8IWF9 413 aa18.66■□□□□ 0.58
CTSD-205ENST00000438213 RASGRP4Q8TDF6 673 aa18.66■□□□□ 0.58
CTSD-205ENST00000438213 PHF20Q9BVI0 1012 aa18.66■□□□□ 0.58
CTSD-205ENST00000438213 MEIS1O00470 390 aa18.65■□□□□ 0.58
CTSD-205ENST00000438213 TLR3O15455 904 aaKnown RBP18.65■□□□□ 0.58
CTSD-205ENST00000438213 SORBS3O60504 671 aa18.65■□□□□ 0.58
CTSD-205ENST00000438213 PQBP1O60828 265 aaKnown RBP18.65■□□□□ 0.58
CTSD-205ENST00000438213 USP11P51784 963 aa18.65■□□□□ 0.58
CTSD-205ENST00000438213 TRIM29Q14134 588 aa18.65■□□□□ 0.58
CTSD-205ENST00000438213 SLC43A3Q8NBI5 491 aa18.65■□□□□ 0.58
CTSD-205ENST00000438213 KCNH7Q9NS40 1196 aa18.65■□□□□ 0.58
CTSD-205ENST00000438213 ZMYND8Q9ULU4 1186 aaPredicted RBP18.65■□□□□ 0.58
CTSD-205ENST00000438213 KCNJ14Q9UNX9 436 aa18.65■□□□□ 0.58
CTSD-205ENST00000438213 ADAMTS3O15072 1205 aa18.64■□□□□ 0.57
CTSD-205ENST00000438213 PSMC6P62333 389 aa18.64■□□□□ 0.57
CTSD-205ENST00000438213 HMGN5P82970 282 aaKnown RBP18.64■□□□□ 0.57
CTSD-205ENST00000438213 HSDL1Q3SXM5 330 aa18.64■□□□□ 0.57
CTSD-205ENST00000438213 CYP2W1Q8TAV3 490 aa18.64■□□□□ 0.57
CTSD-205ENST00000438213 CRYGNQ8WXF5 182 aa18.64■□□□□ 0.57
CTSD-205ENST00000438213 KATNAL1Q9BW62 490 aa18.64■□□□□ 0.57
CTSD-205ENST00000438213 BRMS1Q9HCU9 246 aa18.64■□□□□ 0.57
CTSD-205ENST00000438213 JAK2O60674 1132 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 DTNBO60941 627 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 ATP9AO75110 1047 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 CLTBP09497 229 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 HOXD8P13378 290 aaPredicted RBP18.63■□□□□ 0.57
CTSD-205ENST00000438213 KCNA2P16389 499 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 SYN1P17600 705 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 NBPF20Q3BBV1 942 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 NFRKBQ6P4R8 1299 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 KRT25Q7Z3Z0 450 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 PLA2G4DQ86XP0 818 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms