RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 DCNP07585 359 aaKnown RBP11.04□□□□□ -0.64
RPE-209ENST00000438191 RBM25P49756 843 aaKnown RBP11.04□□□□□ -0.64
RPE-209ENST00000438191 SPECC1Q5M775 1068 aa11.04□□□□□ -0.64
RPE-209ENST00000438191 TDRD5Q8NAT2 981 aaKnown RBP11.04□□□□□ -0.64
RPE-209ENST00000438191 PRPF38AQ8NAV1 312 aaKnown RBP11.04□□□□□ -0.64
RPE-209ENST00000438191 KLHL23Q8NBE8 558 aa11.04□□□□□ -0.64
RPE-209ENST00000438191 SEPT8Q92599 483 aa11.04□□□□□ -0.64
RPE-209ENST00000438191 CDCA3Q99618 268 aaPredicted RBP11.04□□□□□ -0.64
RPE-209ENST00000438191 HNRNPABQ99729 332 aaKnown RBP11.04□□□□□ -0.64
RPE-209ENST00000438191 DUSP12Q9UNI6 340 aa11.04□□□□□ -0.64
RPE-209ENST00000438191 RAD50Q92878 1312 aa11.04□□□□□ -0.64
RPE-209ENST00000438191 RSPH10B2B2RC85 870 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 MMP3P08254 477 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 RSPH10BP0C881 870 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 SRGAP2BP0DMP2 458 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 EEF2P13639 858 aaKnown RBP11.03□□□□□ -0.64
RPE-209ENST00000438191 AKR1B1P15121 316 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 HOXB8P17481 243 aaPredicted RBP11.03□□□□□ -0.64
RPE-209ENST00000438191 SPEM2Q0P670 501 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 TDGQ13569 410 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 BTG3Q14201 252 aaPredicted RBP11.03□□□□□ -0.64
RPE-209ENST00000438191 PLCD3Q8N3E9 789 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 KAT2BQ92831 832 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 ZNF689Q96CS4 500 aaPredicted RBP11.03□□□□□ -0.64
RPE-209ENST00000438191 KIF12Q96FN5 646 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 NECTIN4Q96NY8 510 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 NUP88Q99567 741 aaPredicted RBP11.03□□□□□ -0.64
RPE-209ENST00000438191 OSBPL7Q9BZF2 842 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 USP44Q9H0E7 712 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 ACAD9Q9H845 621 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 SLC38A10Q9HBR0 1119 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 GOPCQ9HD26 462 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 HOMER2Q9NSB8 354 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 HDAC6Q9UBN7 1215 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 PA2G4Q9UQ80 394 aaKnown RBP11.03□□□□□ -0.64
RPE-209ENST00000438191 IL16Q14005 1332 aa11.03□□□□□ -0.64
RPE-209ENST00000438191 ITPR1Q14643 2758 aa11.02□□□□□ -0.64
RPE-209ENST00000438191 TBC1D4O60343 1298 aa11.02□□□□□ -0.65
RPE-209ENST00000438191 LILRB5O75023 590 aa11.02□□□□□ -0.65
RPE-209ENST00000438191 POLR3DP05423 398 aaPredicted RBP11.02□□□□□ -0.65
RPE-209ENST00000438191 OAZ1P54368 228 aa11.02□□□□□ -0.65
RPE-209ENST00000438191 ZBTB44Q8NCP5 570 aa11.02□□□□□ -0.65
RPE-209ENST00000438191 COPS5Q92905 334 aa11.02□□□□□ -0.65
RPE-209ENST00000438191 GMEB2Q9UKD1 530 aa11.02□□□□□ -0.65
RPE-209ENST00000438191 CTDP1Q9Y5B0 961 aaPredicted RBP11.02□□□□□ -0.65
RPE-209ENST00000438191 PCDHGA2Q9Y5H1 932 aa11.02□□□□□ -0.65
RPE-209ENST00000438191 PATJQ8NI35 1801 aa11.02□□□□□ -0.65
RPE-209ENST00000438191 MYH7BA7E2Y1 1941 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 LOC400499M0QZD8 3231 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 NKRFO15226 690 aaKnown RBP eCLIP11.01□□□□□ -0.65
RPE-209ENST00000438191 RAD21O60216 631 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 CYP7A1P22680 504 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 MIGA1Q8NAN2 632 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 MICAL1Q8TDZ2 1067 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 ATRIPQ8WXE1 791 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 NEUROD6Q96NK8 337 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 TBC1D17Q9HA65 648 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 SNRKQ9NRH2 765 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 CACNA2D2Q9NY47 1150 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 WNT16Q9UBV4 365 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 FBXO4Q9UKT5 387 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 AKAP2Q9Y2D5 859 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 MRPL42Q9Y6G3 142 aaKnown RBP11.01□□□□□ -0.65
RPE-209ENST00000438191 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.01□□□□□ -0.65
RPE-209ENST00000438191 IGSF10Q6WRI0 2623 aa11.01□□□□□ -0.65
RPE-209ENST00000438191 DENND4AQ7Z401 1863 aa11□□□□□ -0.65
RPE-209ENST00000438191 TM4SF5O14894 197 aa11□□□□□ -0.65
RPE-209ENST00000438191 GDF9O60383 454 aa11□□□□□ -0.65
RPE-209ENST00000438191 HOXD8P13378 290 aaPredicted RBP11□□□□□ -0.65
RPE-209ENST00000438191 GLULP15104 373 aa11□□□□□ -0.65
RPE-209ENST00000438191 RFX1P22670 979 aa11□□□□□ -0.65
RPE-209ENST00000438191 TFCP2Q12800 502 aa11□□□□□ -0.65
RPE-209ENST00000438191 CERS3Q8IU89 383 aa11□□□□□ -0.65
RPE-209ENST00000438191 RASGRP4Q8TDF6 673 aa11□□□□□ -0.65
RPE-209ENST00000438191 MAP4K1Q92918 833 aa11□□□□□ -0.65
RPE-209ENST00000438191 KIFC2Q96AC6 838 aa11□□□□□ -0.65
RPE-209ENST00000438191 BBC3Q96PG8 261 aaPredicted RBP11□□□□□ -0.65
RPE-209ENST00000438191 PURBQ96QR8 312 aaKnown RBP11□□□□□ -0.65
RPE-209ENST00000438191 ADAM7Q9H2U9 754 aa11□□□□□ -0.65
RPE-209ENST00000438191 CYP26B1Q9NR63 512 aa11□□□□□ -0.65
RPE-209ENST00000438191 RNF146Q9NTX7 359 aa11□□□□□ -0.65
RPE-209ENST00000438191 USTQ9Y2C2 406 aa11□□□□□ -0.65
RPE-209ENST00000438191 SIT1Q9Y3P8 196 aa11□□□□□ -0.65
RPE-209ENST00000438191 WDFY3Q8IZQ1 3526 aa11□□□□□ -0.65
RPE-209ENST00000438191 NARSO43776 548 aaKnown RBP10.99□□□□□ -0.65
RPE-209ENST00000438191 IGSF3O75054 1194 aa10.99□□□□□ -0.65
RPE-209ENST00000438191 CYP2E1P05181 493 aaPredicted RBP10.99□□□□□ -0.65
RPE-209ENST00000438191 UQCRFS1P1P0C7P4 283 aa10.99□□□□□ -0.65
RPE-209ENST00000438191 MTHFRP42898 656 aa10.99□□□□□ -0.65
RPE-209ENST00000438191 ITIH3Q06033 890 aa10.99□□□□□ -0.65
RPE-209ENST00000438191 PPP2R5BQ15173 497 aa10.99□□□□□ -0.65
RPE-209ENST00000438191 GORABQ5T7V8 394 aa10.99□□□□□ -0.65
RPE-209ENST00000438191 IL31Q6EBC2 164 aa10.99□□□□□ -0.65
RPE-209ENST00000438191 PHLDB3Q6NSJ2 640 aa10.99□□□□□ -0.65
RPE-209ENST00000438191 CES5AQ6NT32 575 aa10.99□□□□□ -0.65
RPE-209ENST00000438191 LLGL2Q6P1M3 1020 aa10.99□□□□□ -0.65
RPE-209ENST00000438191 LRRC47Q8N1G4 583 aaKnown RBP10.99□□□□□ -0.65
RPE-209ENST00000438191 C7orf31Q8N865 590 aa10.99□□□□□ -0.65
RPE-209ENST00000438191 ZCCHC14Q8WYQ9 949 aaKnown RBP10.99□□□□□ -0.65
RPE-209ENST00000438191 GATA6Q92908 595 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms