RNA–Protein interactions for RNA: ENST00000435149.1

NCSTN-206, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-206ENST00000435149 RBL2Q08999 1139 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 TNNI3KQ59H18 835 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 CCDC158Q5M9N0 1113 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 TTC39AQ5SRH9 613 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 PRR23BQ6ZRT6 265 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 TBC1D9Q6ZT07 1266 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.8□□□□□ -0.84
NCSTN-206ENST00000435149 ANKRD35Q8N283 1001 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 FAM133AQ8N9E0 248 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 SECISBP2LQ93073 1101 aaKnown RBP9.8□□□□□ -0.84
NCSTN-206ENST00000435149 TOP1MTQ969P6 601 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 DDX27Q96GQ7 796 aaKnown RBP9.8□□□□□ -0.84
NCSTN-206ENST00000435149 LARP6Q9BRS8 491 aaKnown RBP9.8□□□□□ -0.84
NCSTN-206ENST00000435149 TEX13BQ9BXU2 312 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 VCPKMTQ9H867 229 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 PDGFCQ9NRA1 345 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 HMG20BQ9P0W2 317 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 PPP1R9AQ9ULJ8 1098 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 USP18Q9UMW8 372 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 RWDD3Q9Y3V2 267 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.8□□□□□ -0.84
NCSTN-206ENST00000435149 FPGT-TNNI3KV9GXZ4 949 aa9.8□□□□□ -0.84
NCSTN-206ENST00000435149 TRIP12Q14669 1992 aaPredicted RBP9.79□□□□□ -0.84
NCSTN-206ENST00000435149 SMG1Q96Q15 3661 aaKnown RBP9.79□□□□□ -0.84
NCSTN-206ENST00000435149 UPP2O95045 317 aa9.79□□□□□ -0.84
NCSTN-206ENST00000435149 LINC00271P0C7V0 271 aa9.79□□□□□ -0.84
NCSTN-206ENST00000435149 CKBP12277 381 aa9.79□□□□□ -0.84
NCSTN-206ENST00000435149 CPT1AP50416 773 aa9.79□□□□□ -0.84
NCSTN-206ENST00000435149 PI16Q6UXB8 463 aa9.79□□□□□ -0.84
NCSTN-206ENST00000435149 UNQ6494/PRO21346Q6UXR6 183 aa9.79□□□□□ -0.84
NCSTN-206ENST00000435149 FIBCD1Q8N539 461 aa9.79□□□□□ -0.84
NCSTN-206ENST00000435149 DHX38Q92620 1227 aaKnown RBP9.79□□□□□ -0.84
NCSTN-206ENST00000435149 CTAGE1Q96RT6 745 aa9.79□□□□□ -0.84
NCSTN-206ENST00000435149 TSHZ2Q9NRE2 1034 aa9.79□□□□□ -0.84
NCSTN-206ENST00000435149 LRP2BPQ9P2M1 347 aa9.79□□□□□ -0.84
NCSTN-206ENST00000435149 FANCMQ8IYD8 2048 aa9.78□□□□□ -0.84
NCSTN-206ENST00000435149 SCN10AQ9Y5Y9 1956 aa9.78□□□□□ -0.84
NCSTN-206ENST00000435149 C2CD4DB7Z1M9 353 aa9.78□□□□□ -0.84
NCSTN-206ENST00000435149 MPHOSPH10O00566 681 aaKnown RBP9.78□□□□□ -0.84
NCSTN-206ENST00000435149 ASGR2P07307 311 aa9.78□□□□□ -0.84
NCSTN-206ENST00000435149 TGM1P22735 817 aa9.78□□□□□ -0.84
NCSTN-206ENST00000435149 TAPT1Q6NXT6 567 aa9.78□□□□□ -0.84
NCSTN-206ENST00000435149 RBM23Q86U06 439 aaKnown RBP9.78□□□□□ -0.84
NCSTN-206ENST00000435149 ERC1Q8IUD2 1116 aa9.78□□□□□ -0.84
NCSTN-206ENST00000435149 NETO1Q8TDF5 533 aa9.78□□□□□ -0.84
NCSTN-206ENST00000435149 OXER1Q8TDS5 423 aa9.78□□□□□ -0.84
NCSTN-206ENST00000435149 PANK1Q8TE04 598 aa9.78□□□□□ -0.84
NCSTN-206ENST00000435149 BORCS6Q96GS4 357 aa9.78□□□□□ -0.84
NCSTN-206ENST00000435149 NOP58Q9Y2X3 529 aaKnown RBP9.78□□□□□ -0.84
NCSTN-206ENST00000435149 ASB14A6NK59 587 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 SRRM3A6NNA2 597 aaPredicted RBP9.77□□□□□ -0.85
NCSTN-206ENST00000435149 CNTN2Q02246 1040 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 SOWAHCQ53LP3 525 aaPredicted RBP9.77□□□□□ -0.85
NCSTN-206ENST00000435149 HSP90AB4PQ58FF6 505 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 N4BP2L1Q5TBK1 243 aaPredicted RBP9.77□□□□□ -0.85
NCSTN-206ENST00000435149 NAA16Q6N069 864 aaPredicted RBP9.77□□□□□ -0.85
NCSTN-206ENST00000435149 CEP85Q6P2H3 762 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 FBXO16Q8IX29 292 aaPredicted RBP9.77□□□□□ -0.85
NCSTN-206ENST00000435149 ZNF454Q8N9F8 522 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 DBF4BQ8NFT6 615 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 ATP8B4Q8TF62 1192 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 IL17RAQ96F46 866 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 ZNF512BQ96KM6 892 aaPredicted RBP9.77□□□□□ -0.85
NCSTN-206ENST00000435149 NEK1Q96PY6 1258 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 DBNDD2Q9BQY9 259 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 PLVAPQ9BX97 442 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 S1PR5Q9H228 398 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 CHMP4BQ9H444 224 aaKnown RBP9.77□□□□□ -0.85
NCSTN-206ENST00000435149 SH2D4AQ9H788 454 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 ERVK-5Q9HDB9 667 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 ANKFY1Q9P2R3 1169 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 DDX19BQ9UMR2 479 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 PLAGL2Q9UPG8 496 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 TMX2Q9Y320 296 aa9.77□□□□□ -0.85
NCSTN-206ENST00000435149 IGSF3O75054 1194 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 HMMRO75330 724 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 DNAJB1P25685 340 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 SLC4A3P48751 1232 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 RBM10P98175 930 aaKnown RBP9.76□□□□□ -0.85
NCSTN-206ENST00000435149 MBTPS1Q14703 1052 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 DUSP28Q4G0W2 176 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 GDF6Q6KF10 455 aaPredicted RBP9.76□□□□□ -0.85
NCSTN-206ENST00000435149 TRAF7Q6Q0C0 670 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 ADGRD1Q6QNK2 874 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 KIAA1211Q6ZU35 1233 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 EEPD1Q7L9B9 569 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 ADGRA1Q86SQ6 560 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 TTC6Q86TZ1 520 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 CLP1Q92989 425 aaKnown RBP9.76□□□□□ -0.85
NCSTN-206ENST00000435149 KCNK17Q96T54 332 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 IFIH1Q9BYX4 1025 aaKnown RBP9.76□□□□□ -0.85
NCSTN-206ENST00000435149 ARHGEF10LQ9HCE6 1279 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 SNRKQ9NRH2 765 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 RCAN3Q9UKA8 241 aa9.76□□□□□ -0.85
NCSTN-206ENST00000435149 NAV2Q8IVL1 2488 aa9.75□□□□□ -0.85
NCSTN-206ENST00000435149 COL4A3Q01955 1670 aa9.75□□□□□ -0.85
NCSTN-206ENST00000435149 SPTLC1O15269 473 aa9.75□□□□□ -0.85
NCSTN-206ENST00000435149 KPNA6O60684 536 aa9.75□□□□□ -0.85
NCSTN-206ENST00000435149 BRDTQ58F21 947 aaPredicted RBP9.75□□□□□ -0.85
NCSTN-206ENST00000435149 TMEM179Q6ZVK1 233 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms