RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 IRX5P78411 483 aaPredicted RBP17.69■□□□□ 0.42
TREX1-201ENST00000433541 GUCY1B3Q02153 619 aa17.69■□□□□ 0.42
TREX1-201ENST00000433541 SAFBQ15424 915 aaKnown RBP eCLIP17.69■□□□□ 0.42
TREX1-201ENST00000433541 CDHR1Q96JP9 859 aa17.69■□□□□ 0.42
TREX1-201ENST00000433541 INPP4AQ96PE3 977 aaPredicted RBP17.69■□□□□ 0.42
TREX1-201ENST00000433541 UPF3AQ9H1J1 476 aaKnown RBP17.69■□□□□ 0.42
TREX1-201ENST00000433541 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.69■□□□□ 0.42
TREX1-201ENST00000433541 NOP56O00567 594 aaKnown RBP17.68■□□□□ 0.42
TREX1-201ENST00000433541 ADAMTS3O15072 1205 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 RGS20O76081 388 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 ASGR1P07306 291 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 TGFB3P10600 412 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 UBA1P22314 1058 aaKnown RBP17.68■□□□□ 0.42
TREX1-201ENST00000433541 RGS19P49795 217 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 ACLYP53396 1101 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 SP4Q02446 784 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 NONOQ15233 471 aaKnown RBP eCLIP17.68■□□□□ 0.42
TREX1-201ENST00000433541 CCDC62Q6P9F0 684 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 KRT25Q7Z3Z0 450 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 HSCBQ8IWL3 235 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 DAGLBQ8NCG7 672 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 GPRASP2Q96D09 838 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 GLT1D1Q96MS3 346 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 TSEN34Q9BSV6 310 aaKnown RBP17.68■□□□□ 0.42
TREX1-201ENST00000433541 DDX41Q9UJV9 622 aaKnown RBP17.68■□□□□ 0.42
TREX1-201ENST00000433541 SMC3Q9UQE7 1217 aa17.68■□□□□ 0.42
TREX1-201ENST00000433541 A0A1W2PQ45 241 aaPredicted RBP17.67■□□□□ 0.42
TREX1-201ENST00000433541 A0A1W2PQY0 241 aa17.67■□□□□ 0.42
TREX1-201ENST00000433541 MOXD2PA6NHM9 499 aa17.67■□□□□ 0.42
TREX1-201ENST00000433541 CST5P28325 142 aaPredicted RBP17.67■□□□□ 0.42
TREX1-201ENST00000433541 LAMC2Q13753 1193 aa17.67■□□□□ 0.42
TREX1-201ENST00000433541 NEDD9Q14511 834 aa17.67■□□□□ 0.42
TREX1-201ENST00000433541 KRT40Q6A162 431 aa17.67■□□□□ 0.42
TREX1-201ENST00000433541 TBCKQ8TEA7 893 aa17.67■□□□□ 0.42
TREX1-201ENST00000433541 AFG1LQ8WV93 481 aa17.67■□□□□ 0.42
TREX1-201ENST00000433541 SPATA33Q96N06 139 aa17.67■□□□□ 0.42
TREX1-201ENST00000433541 MXRA8Q9BRK3 442 aa17.67■□□□□ 0.42
TREX1-201ENST00000433541 STARD7Q9NQZ5 370 aa17.67■□□□□ 0.42
TREX1-201ENST00000433541 ALPK3Q96L96 1907 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 SPATA31C2B4DYI2 1134 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 MMP1P03956 469 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 HSP90AA1P07900 732 aaKnown RBP17.66■□□□□ 0.42
TREX1-201ENST00000433541 ITGB5P18084 799 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 MNX1P50219 401 aaPredicted RBP17.66■□□□□ 0.42
TREX1-201ENST00000433541 CEP55Q53EZ4 464 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 CXCL17Q6UXB2 119 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 PIK3AP1Q6ZUJ8 805 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 CYFIP1Q7L576 1253 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 PLA2G4DQ86XP0 818 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 GIMAP8Q8ND71 665 aaPredicted RBP17.66■□□□□ 0.42
TREX1-201ENST00000433541 KLHDC9Q8NEP7 349 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 JADE2Q9NQC1 790 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 POLR3EQ9NVU0 708 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 TCEAL9Q9UHQ7 104 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 PHF24Q9UPV7 400 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 UBIAD1Q9Y5Z9 338 aa17.66■□□□□ 0.42
TREX1-201ENST00000433541 EVI5O60447 810 aa17.65■□□□□ 0.42
TREX1-201ENST00000433541 GJB2P29033 226 aa17.65■□□□□ 0.42
TREX1-201ENST00000433541 ICAM3P32942 547 aa17.65■□□□□ 0.42
TREX1-201ENST00000433541 ARHGAP1Q07960 439 aa17.65■□□□□ 0.42
TREX1-201ENST00000433541 INF2Q27J81 1249 aa17.65■□□□□ 0.42
TREX1-201ENST00000433541 PRR16Q569H4 304 aa17.65■□□□□ 0.42
TREX1-201ENST00000433541 CELF3Q5SZQ8 465 aaKnown RBP17.65■□□□□ 0.42
TREX1-201ENST00000433541 DIS3L2Q8IYB7 885 aaKnown RBP17.65■□□□□ 0.42
TREX1-201ENST00000433541 OXER1Q8TDS5 423 aa17.65■□□□□ 0.42
TREX1-201ENST00000433541 SDF4Q9BRK5 362 aa17.65■□□□□ 0.42
TREX1-201ENST00000433541 ATP11BQ9Y2G3 1177 aa17.65■□□□□ 0.42
TREX1-201ENST00000433541 PDE4DIPQ5VU43 2346 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 H3BQV1 296 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 K7ELQ4 463 aaPredicted RBP17.64■□□□□ 0.41
TREX1-201ENST00000433541 MMP3P08254 477 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 COL6A1P12109 1028 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 SETQ01105 290 aaPredicted RBP17.64■□□□□ 0.41
TREX1-201ENST00000433541 SP2Q02086 613 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 SEMA3FQ13275 785 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 NR5A1Q13285 461 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 NPY5RQ15761 445 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 DGKDQ16760 1214 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 UBE2Q1Q7Z7E8 422 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 CYP2W1Q8TAV3 490 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 UIMC1Q96RL1 719 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 KCNH7Q9NS40 1196 aa17.64■□□□□ 0.41
TREX1-201ENST00000433541 MKI67P46013 3256 aaKnown RBP17.64■□□□□ 0.41
TREX1-201ENST00000433541 DNAH12Q6ZR08 3092 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 MAFGO15525 162 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 KPNA6O60684 536 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 CABYRO75952 493 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 CYP3A4P08684 503 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 LETM2Q2VYF4 491 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 MYSM1Q5VVJ2 828 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 MCTP1Q6DN14 999 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 SLC39A5Q6ZMH5 540 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 NEK8Q86SG6 692 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 C7orf61Q8IZ16 206 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 PPTC7Q8NI37 304 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 ZNF577Q9BSK1 485 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
TREX1-201ENST00000433541 A0A0U1RQG5 324 aaPredicted RBP17.62■□□□□ 0.41
TREX1-201ENST00000433541 A6NJR5 290 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 BTBD18B2RXH4 712 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms