RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 IFIH1Q9BYX4 1025 aaKnown RBP13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 GOLGA6AQ9NYA3 693 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 CNTNAP5Q8WYK1 1306 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 KRT19P08727 400 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 HMGCS2P54868 508 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 ZNF543Q08ER8 600 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 ZNF658Q5TYW1 1059 aaPredicted RBP13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 RCSD1Q6JBY9 416 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 BANK1Q8NDB2 785 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 CDC23Q9UJX2 597 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 ZNRF3Q9ULT6 936 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 FZD1Q9UP38 647 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 ABCB11O95342 1321 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
LRRTM1-206ENST00000433224 MYCP01106 439 aaPredicted RBP13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 TNFAIP3P21580 790 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 MARK3P27448 753 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 KRT31Q15323 416 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 ENOX1Q8TC92 643 aaKnown RBP13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 RTFDC1Q9BY42 306 aaPredicted RBP13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 LARSQ9P2J5 1176 aaKnown RBP13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 MYO1AQ9UBC5 1043 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 TRPC6Q9Y210 931 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 ERCC5P28715 1186 aaPredicted RBP13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 DNM2P50570 870 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 C16orf86Q6ZW13 317 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 ADAT2Q7Z6V5 191 aaKnown RBP13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 USP37Q86T82 979 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 OTUD6BQ8N6M0 293 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 ANKFY1Q9P2R3 1169 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 COL4A3BPQ9Y5P4 624 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 LRRN2O75325 713 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 HPDP32754 393 aaPredicted RBP13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 FMR1Q06787 632 aaKnown RBP eCLIP13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 STRN3Q13033 797 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 WDR24Q96S15 920 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 NBPF3Q9H094 633 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 DDX4Q9NQI0 724 aaKnown RBP13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 PDE4DIPQ5VU43 2346 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 GOLGA8IPA6NC78 632 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 GOLGA6BA6NDN3 693 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 SMIM23A6NLE4 172 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 GOLGA8JA6NMD2 632 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 NDUFAB1O14561 156 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 PLCB3Q01970 1234 aa13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 TTC19Q6DKK2 380 aaPredicted RBP13.74□□□□□ -0.21
LRRTM1-206ENST00000433224 NPHP3-ACAD11A0A0J9YXS1 232 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 OPA1O60313 960 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 TUBBP07437 444 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 VAV2P52735 878 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 NTRK3Q16288 839 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 PPM1KQ8N3J5 372 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 DYDC1Q8WWB3 177 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 AK8Q96MA6 479 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 RMDN3Q96TC7 470 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 MON2Q7Z3U7 1717 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 CCDC172P0C7W6 258 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 CETN2P41208 172 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 MTF1Q14872 753 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 GNPTABQ3T906 1256 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 SFMBT2Q5VUG0 894 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 U2AF1L4Q8WU68 220 aaKnown RBP13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 EMILIN3Q9NT22 766 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 ZNF70Q9UC06 446 aaPredicted RBP13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 SAR1BQ9Y6B6 198 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 PPP1R2P41236 205 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 TOB1P50616 345 aaPredicted RBP13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 SEC23AQ15436 765 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 NBPF9Q3BBW0 867 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 Q3C1V9 767 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 MTERF2Q49AM1 385 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 CFAP58Q5T655 872 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 ARL6IP4Q66PJ3 421 aaKnown RBP13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 MICALCLQ6ZW33 695 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 MCF2L2Q86YR7 1114 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 CCDC50Q8IVM0 306 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 CEP170P1Q96L14 293 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 IL17RBQ9NRM6 502 aa13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 EPN1Q9Y6I3 576 aaPredicted RBP13.73□□□□□ -0.21
LRRTM1-206ENST00000433224 TUBB4BP68371 445 aa13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 ATP2C1P98194 919 aaPredicted RBP13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 MTMR2Q13614 643 aa13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 KIAA0753Q2KHM9 967 aa13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 FAM217BQ9NTX9 383 aaPredicted RBP13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 CD19P15391 556 aa13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 MRPS25P82663 173 aaKnown RBP13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 SNRNP48Q6IEG0 339 aaKnown RBP13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 CC2D1AQ6P1N0 951 aaPredicted RBP13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 KLHL7Q8IXQ5 586 aa13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 FAM204AQ9H8W3 233 aa13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 LAD1O00515 517 aa13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 ANGEL2Q5VTE6 544 aaKnown RBP13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 DEPTORQ8TB45 409 aa13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 SECISBP2LQ93073 1101 aaKnown RBP13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 JMJD4Q9H9V9 463 aa13.72□□□□□ -0.21
LRRTM1-206ENST00000433224 ADAM21Q9UKJ8 722 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms