RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 PRC1O43663 620 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 SRGAP2O75044 1071 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 CETPP11597 493 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 EZRP15311 586 aaKnown RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 CDR1P51861 262 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 PPATQ06203 517 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 PPIL2Q13356 520 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 NNTQ13423 1086 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 GRIK5Q16478 980 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 MOB2Q70IA6 237 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 PARP9Q8IXQ6 854 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 MAB21L3Q8N8X9 362 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 C1orf131Q8NDD1 294 aaKnown RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 NSUN4Q96CB9 384 aaKnown RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 RRP36Q96EU6 259 aaKnown RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 LIMA1Q9UHB6 759 aaKnown RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 FBXO2Q9UK22 296 aaPredicted RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 OTOFQ9HC10 1997 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 ATRNL1Q5VV63 1379 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 RNF225M0QZC1 329 aaPredicted RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 TRPA1O75762 1119 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 PPP1R37O75864 691 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 CD44P16070 742 aaKnown RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 MCAMP43121 646 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 ANTXR2P58335 489 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 HERVK_113P62684 666 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 APBA1Q02410 837 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 ICA1Q05084 483 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 SNAPC2Q13487 334 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 PTGISQ16647 500 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 RCSD1Q6JBY9 416 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 CYB5D1Q6P9G0 228 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 ZSCAN29Q8IWY8 852 aaPredicted RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 FUKQ8N0W3 1084 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 MYCBPAPQ8TBZ2 947 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 OPTNQ96CV9 577 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 AIFM3Q96NN9 605 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 WRNIP1Q96S55 665 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 RUFY1Q96T51 708 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 SLC24A3Q9HC58 644 aa8.53□□□□□ -1.04
CNKSR3-202ENST00000433165 GOLGA6L7A0A1B0GV03 622 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 TBC1D12O60347 775 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 HSF2BPO75031 334 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 CDKL5O76039 1030 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 FAM107AO95990 144 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 SLC8A1P32418 973 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 KRT9P35527 623 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 CLNS1AP54105 237 aaKnown RBP8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 PPP4CP60510 307 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 SARNPP82979 210 aaKnown RBP8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 ATP2B2Q01814 1243 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 CTU1Q7Z7A3 348 aaKnown RBP8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 IFNL1Q8IU54 200 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 CD302Q8IX05 232 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 C3orf20Q8ND61 904 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 CAPZA3Q96KX2 299 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 RNPC3Q96LT9 517 aaKnown RBP8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 PURBQ96QR8 312 aaKnown RBP8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 CHP1Q99653 195 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 ELP3Q9H9T3 547 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 PICK1Q9NRD5 415 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 PAG1Q9NWQ8 432 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 HERC5Q9UII4 1024 aaKnown RBP8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 ZNF112Q9UJU3 913 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 SCAF8Q9UPN6 1271 aaKnown RBP8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 FKTNO75072 461 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 C2orf54Q08AI8 447 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 IFFO1Q0D2I5 559 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 BIRC2Q13490 618 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 VGLL4Q14135 290 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 KRT31Q15323 416 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 SPECC1Q5M775 1068 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 CCDC122Q5T0U0 273 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 TAX1BP1Q86VP1 789 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 NLRP14Q86W24 1093 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 GRAMD1CQ8IYS0 662 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 ZNF483Q8TF39 744 aaPredicted RBP8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 ZIM3Q96PE6 472 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 CCT8L2Q96SF2 557 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 NUP88Q99567 741 aaPredicted RBP8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 ZFYVE28Q9HCC9 887 aa8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 TPX2Q9ULW0 747 aaKnown RBP8.52□□□□□ -1.05
CNKSR3-202ENST00000433165 PPP1R3GB7ZBB8 358 aa8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 FOXP2O15409 715 aa8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 KRT86O43790 486 aa8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 HLA-DOAP06340 250 aa8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 PDHBP11177 359 aa8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 CDC25AP30304 524 aa8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 CCNHP51946 323 aaPredicted RBP8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 CACNB3P54284 484 aa8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 GRIN1Q05586 938 aa8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 IMMTQ16891 758 aaKnown RBP8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 RNF187Q5TA31 235 aaPredicted RBP8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 SH3RF1Q7Z6J0 888 aa8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 SH2D3CQ8N5H7 860 aa8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 CAGE1Q8TC20 777 aa8.51□□□□□ -1.05
CNKSR3-202ENST00000433165 DNAJC7Q99615 494 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms