RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 MMP3P08254 477 aa13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 EPHB4P54760 987 aa13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 AKAP17AQ02040 695 aaKnown RBP13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 FPGSQ05932 587 aa13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 SSRP1Q08945 709 aaKnown RBP13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 SHHQ15465 462 aa13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 PFKFB3Q16875 520 aaPredicted RBP13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 TRIM22Q8IYM9 498 aa13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 ZNF713Q8N859 430 aaPredicted RBP13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 NECAB1Q8N987 351 aa13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 PHKBQ93100 1093 aa13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 TRMT13Q9NUP7 481 aaKnown RBP13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 RTEL1Q9NZ71 1219 aa13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 A6NJR5 290 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 RGS20O76081 388 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 TIMP1P01033 207 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 ZNF286BP0CG31 522 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 CYP2C18P33260 490 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 PKN1Q16512 942 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 NBPF20Q3BBV1 942 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 WWC2Q6AWC2 1192 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 VSIG10LQ86VR7 867 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 DHX37Q8IY37 1157 aaKnown RBP13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 SLC43A3Q8NBI5 491 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 SLC26A6Q9BXS9 759 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 PSTPIP2Q9H939 334 aa13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 DDX41Q9UJV9 622 aaKnown RBP13.65□□□□□ -0.22
TRERNA1-201ENST00000431460 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 MEIS2O14770 477 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 PPFIA3O75145 1194 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 CD2BP2O95400 341 aaKnown RBP13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 CTDNEP1O95476 244 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 GGPS1O95749 300 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 CD4P01730 458 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 CYP2C9P11712 490 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 SCG2P13521 617 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 UBA1P22314 1058 aaKnown RBP13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 NAPAP54920 295 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 CCL23P55773 120 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 PPP1R18Q6NYC8 613 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 TEX2Q8IWB9 1127 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 RNPC3Q96LT9 517 aaKnown RBP13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 LLPHQ9BRT6 129 aaKnown RBP13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 HIPK3Q9H422 1215 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 BARHL2Q9NY43 387 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
TRERNA1-201ENST00000431460 STXBP3O00186 592 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 KPNA6O60684 536 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 DEXIO95424 95 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 ACRP10323 421 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 CSF2RAP15509 400 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 MRPS9P82933 396 aaKnown RBP13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 SP2Q02086 613 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 SP4Q02446 784 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 ST3GAL1Q11201 340 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 LRIT3Q3SXY7 679 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 MFSD5Q6N075 450 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 Q7L0L9 218 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 FAM177A1Q8N128 213 aaPredicted RBP13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 PGBD1Q96JS3 809 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 SPATA33Q96N06 139 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 ALG1Q9BT22 464 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 FRMPD4Q14CM0 1322 aa13.63□□□□□ -0.23
TRERNA1-201ENST00000431460 SPDYE3A6NKU9 549 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 PIK3CDO00329 1044 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 LAMC2Q13753 1193 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 DGKDQ16760 1214 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 TMEM199Q8N511 208 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 NSUN7Q8NE18 718 aaKnown RBP13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 CCDC12Q8WUD4 166 aaPredicted RBP13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 TMX3Q96JJ7 454 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 GLT8D2Q9H1C3 349 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 BCAS3Q9H6U6 928 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 MLXIPQ9HAP2 919 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 SH3GLB2Q9NR46 395 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 PKD2L1Q9P0L9 805 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 NOD1Q9Y239 953 aa13.62□□□□□ -0.23
TRERNA1-201ENST00000431460 ESYT2A0FGR8 921 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 PPIGQ13427 754 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 HSDL1Q3SXM5 330 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 CELF3Q5SZQ8 465 aaKnown RBP13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 MYSM1Q5VVJ2 828 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 PCNX4Q63HM2 1172 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 KCNV1Q6PIU1 500 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 PPTC7Q8NI37 304 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 WASF1Q92558 559 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 SNX21Q969T3 373 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 EMID1Q96A84 441 aaPredicted RBP13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 SCLYQ96I15 445 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 FAM161BQ96MY7 647 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 NOC4LQ9BVI4 516 aaKnown RBP13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 WNT8AQ9H1J5 351 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 RIC8AQ9NPQ8 531 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 ORC3Q9UBD5 711 aaPredicted RBP13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 PCDHA6Q9UN73 950 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms