RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 UHMK1Q8TAS1 419 aaKnown RBP4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 CHTF18Q8WVB6 975 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 JDP2Q8WYK2 163 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 ALPK1Q96QP1 1244 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 ADAMTS10Q9H324 1103 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 CABP5Q9NP86 173 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 SPTLC3Q9NUV7 552 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 CLDND1Q9NY35 253 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 TMEM59LQ9UK28 342 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 EID1Q9Y6B2 187 aa4.34□□□□□ -1.71
HMGB1P27-201ENST00000431429 PTPDC1A2A3K4 754 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 MAN2B1O00754 1011 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 MSL3P1P0C860 447 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 SLC6A11P48066 632 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 NEK2P51955 445 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 EPHA5P54756 1037 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 JAM2P57087 298 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 PHC1P78364 1004 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 TMPRSS15P98073 1019 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 MVKQ03426 396 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 GPR158Q5T848 1215 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 MROH9Q5TGP6 573 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 CCDC181Q5TID7 509 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 SYDE2Q5VT97 1194 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 ANGEL2Q5VTE6 544 aaKnown RBP4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 CYP4F22Q6NT55 531 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 CEP68Q76N32 757 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 TEX2Q8IWB9 1127 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 CISD2Q8N5K1 135 aaKnown RBP4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 CNTD1Q8N815 330 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 PDZD8Q8NEN9 1154 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 COG1Q8WTW3 980 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 DLG3Q92796 817 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 SHISA4Q96DD7 197 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 TMEM169Q96HH4 297 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 CAMKK2Q96RR4 588 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 CEP89Q96ST8 783 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 BOCQ9BWV1 1114 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 JAM3Q9BX67 310 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 EPB41L1Q9H4G0 881 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 SLC6A20Q9NP91 592 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 OXSMQ9NWU1 459 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 GULP1Q9UBP9 304 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 CCDC39Q9UFE4 941 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 G3BP2Q9UN86 482 aaKnown RBP4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 FAN1Q9Y2M0 1017 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 SPO11Q9Y5K1 396 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 B3GALT1Q9Y5Z6 326 aa4.33□□□□□ -1.72
HMGB1P27-201ENST00000431429 TNKSO95271 1327 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 NKRFO15226 690 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 GAS7O60861 476 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 CLASP2O75122 1294 aaKnown RBP4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 ULK1O75385 1050 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 TADA3O75528 432 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 USP2O75604 605 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 HPXP02790 462 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 APPP05067 770 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 GLI4P10075 376 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 FUT4P22083 530 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 DNM2P50570 870 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 KRT85P78386 507 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 OCRLQ01968 901 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 IKZF1Q13422 519 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 CRY1Q16526 586 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 FIGNQ5HY92 759 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 ZNF574Q6ZN55 896 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 VSIG10LQ86VR7 867 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 OSTM1Q86WC4 334 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 CLRN3Q8NCR9 226 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 PLCD4Q9BRC7 762 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 CCDC8Q9H0W5 538 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 VTA1Q9NP79 307 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 PAK6Q9NQU5 681 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 THG1LQ9NWX6 298 aaKnown RBP4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 H2AFY2Q9P0M6 372 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 MARCH2Q9P0N8 246 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 IMPACTQ9P2X3 320 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 TRHDEQ9UKU6 1024 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 SRPK3Q9UPE1 567 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 SLC5A6Q9Y289 635 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 ZKSCAN5Q9Y2L8 839 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 SPEF1Q9Y4P9 236 aa4.32□□□□□ -1.72
HMGB1P27-201ENST00000431429 SLC12A8A0AV02 714 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 C22orf46C9J442 243 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 COBLO75128 1261 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 ABLIM3O94929 683 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 FBXO21O94952 628 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 SESN3P58005 492 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 RTP1P59025 263 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 IL2P60568 153 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 ST5P78524 1137 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 SMAD3P84022 425 aaKnown RBP4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 CHRNEQ04844 493 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 ZP2Q05996 745 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 SPIRE1Q08AE8 756 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 FAPQ12884 760 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 KIR3DS1Q14943 382 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 SEC23AQ15436 765 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 TERF2Q15554 542 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms