RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 RASSF7Q02833 373 aa17.74■□□□□ 0.43
RIF1-204ENST00000430328 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
RIF1-204ENST00000430328 ANKRD2Q9GZV1 360 aa17.74■□□□□ 0.43
RIF1-204ENST00000430328 METTL14Q9HCE5 456 aaKnown RBP17.74■□□□□ 0.43
RIF1-204ENST00000430328 NDE1Q9NXR1 346 aa17.74■□□□□ 0.43
RIF1-204ENST00000430328 EDEM3Q9BZQ6 932 aa17.74■□□□□ 0.43
RIF1-204ENST00000430328 PKD2L2Q9NZM6 624 aa17.74■□□□□ 0.43
RIF1-204ENST00000430328 NFKBIAP25963 317 aa17.74■□□□□ 0.43
RIF1-204ENST00000430328 COPB1P53618 953 aaKnown RBP17.74■□□□□ 0.43
RIF1-204ENST00000430328 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.74■□□□□ 0.43
RIF1-204ENST00000430328 ADA2Q9NZK5 511 aa17.74■□□□□ 0.43
RIF1-204ENST00000430328 HACD3Q9P035 362 aa17.74■□□□□ 0.43
RIF1-204ENST00000430328 ZNF233A6NK53 670 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 TOMM70O94826 608 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 DLATP10515 647 aaKnown RBP17.73■□□□□ 0.43
RIF1-204ENST00000430328 CCDC184Q52MB2 194 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 ALKBH8Q96BT7 664 aaKnown RBP17.73■□□□□ 0.43
RIF1-204ENST00000430328 ZNF644Q9H582 1327 aaPredicted RBP17.73■□□□□ 0.43
RIF1-204ENST00000430328 MAPK4P31152 587 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 RSRC2Q7L4I2 434 aaKnown RBP17.73■□□□□ 0.43
RIF1-204ENST00000430328 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 OSBPL1AQ9BXW6 950 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 SUPT6HQ7KZ85 1726 aaKnown RBP17.73■□□□□ 0.43
RIF1-204ENST00000430328 DIS3L2Q8IYB7 885 aaKnown RBP17.73■□□□□ 0.43
RIF1-204ENST00000430328 SLC8A2Q9UPR5 921 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 TRAF3IP3Q9Y228 551 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 CA4P22748 312 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 DARS2Q6PI48 645 aaKnown RBP17.73■□□□□ 0.43
RIF1-204ENST00000430328 GPBP1Q86WP2 473 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 SNX25Q9H3E2 840 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 PANK4Q9NVE7 773 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 A0A0G2JND7 137 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 SRGAP2CP0DJJ0 459 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 GRK2P25098 689 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 RUNX1T1Q06455 604 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 WASHC5Q12768 1159 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 EHD2Q9NZN4 543 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 KRT17Q04695 432 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 SF3B3Q15393 1217 aaKnown RBP17.73■□□□□ 0.43
RIF1-204ENST00000430328 LVRNQ6Q4G3 990 aa17.73■□□□□ 0.43
RIF1-204ENST00000430328 REXO1Q8N1G1 1221 aaKnown RBP17.73■□□□□ 0.43
RIF1-204ENST00000430328 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 AARS2Q5JTZ9 985 aaKnown RBP17.72■□□□□ 0.43
RIF1-204ENST00000430328 CDC37L1Q7L3B6 337 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 KCTD6Q8NC69 237 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 VPS39Q96JC1 886 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 NLRP4Q96MN2 994 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 ZMYND12Q9H0C1 365 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 KIAA1468Q9P260 1216 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 KDRP35968 1356 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 PGRMC1O00264 195 aaKnown RBP17.72■□□□□ 0.43
RIF1-204ENST00000430328 ZBED4O75132 1171 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 TDRD7Q8NHU6 1098 aaKnown RBP17.72■□□□□ 0.43
RIF1-204ENST00000430328 PYROXD1Q8WU10 500 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 EYA3Q99504 573 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 RASSF9O75901 435 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 SLCO1A2P46721 670 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 PAPOLBQ9NRJ5 636 aaKnown RBP17.72■□□□□ 0.43
RIF1-204ENST00000430328 SLC1A4P43007 532 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 GLG1Q92896 1179 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 SOX13Q9UN79 622 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 PCDHB4Q9Y5E5 795 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 ZNF500O60304 480 aaPredicted RBP17.72■□□□□ 0.43
RIF1-204ENST00000430328 TMPRSS15P98073 1019 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 MMTAG2Q9BU76 263 aaKnown RBP17.72■□□□□ 0.43
RIF1-204ENST00000430328 RUBCNLQ9H714 662 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 DHX9Q08211 1270 aaKnown RBP17.72■□□□□ 0.43
RIF1-204ENST00000430328 ZNF555Q8NEP9 628 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 PBKQ96KB5 322 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 ZFP69BQ9UJL9 534 aa17.72■□□□□ 0.43
RIF1-204ENST00000430328 NIP7Q9Y221 180 aaKnown RBP eCLIP17.72■□□□□ 0.43
RIF1-204ENST00000430328 SNX2O60749 519 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 FAM178BQ8IXR5 827 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 ADAMTS2O95450 1211 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 PSMA3P25788 255 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 NUP62P37198 522 aaPredicted RBP17.71■□□□□ 0.43
RIF1-204ENST00000430328 BTBD6Q96KE9 485 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 TLR3O15455 904 aaKnown RBP17.71■□□□□ 0.43
RIF1-204ENST00000430328 CENPUQ71F23 418 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 ADNPQ9H2P0 1102 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 IL10P22301 178 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 PPP1R2P3Q6NXS1 205 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 MTRQ99707 1265 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 PARVGQ9HBI0 331 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 UBXN8O00124 270 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 MBD4O95243 580 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 HDLBPQ00341 1268 aaKnown RBP17.71■□□□□ 0.43
RIF1-204ENST00000430328 EXOC3L4Q17RC7 722 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 TRIM69Q86WT6 500 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 ELAC2Q9BQ52 826 aaKnown RBP17.71■□□□□ 0.43
RIF1-204ENST00000430328 DENND2AQ9ULE3 1009 aa17.71■□□□□ 0.43
RIF1-204ENST00000430328 FNDC3AQ9Y2H6 1198 aaKnown RBP17.7■□□□□ 0.42
RIF1-204ENST00000430328 K7ENM7 598 aa17.7■□□□□ 0.42
RIF1-204ENST00000430328 MEIS1O00470 390 aa17.7■□□□□ 0.42
RIF1-204ENST00000430328 AFPP02771 609 aaKnown RBP17.7■□□□□ 0.42
RIF1-204ENST00000430328 TBL3Q12788 808 aaKnown RBP17.7■□□□□ 0.42
RIF1-204ENST00000430328 SMCR8Q8TEV9 937 aaPredicted RBP17.7■□□□□ 0.42
RIF1-204ENST00000430328 XAGE3Q8WTP9 111 aa17.7■□□□□ 0.42
RIF1-204ENST00000430328 HNRNPRO43390 633 aaKnown RBP17.7■□□□□ 0.42
RIF1-204ENST00000430328 ARL4AP40617 200 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms