RNA–Protein interactions for RNA: ENST00000429017.2

HOXD8-202, Transcript of homeobox D8, humanhuman

TSL 2 BASIC

Gene HOXD8, Length 1,608 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-202ENST00000429017 KLRC3Q07444 240 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 SKIV2LQ15477 1246 aaKnown RBP7.84□□□□□ -1.15
HOXD8-202ENST00000429017 KCNA10Q16322 511 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 SBK1Q52WX2 424 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 C20orf194Q5TEA3 1177 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 SNRNP48Q6IEG0 339 aaKnown RBP7.84□□□□□ -1.15
HOXD8-202ENST00000429017 MAMDC4Q6UXC1 1216 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 SLCO4C1Q6ZQN7 724 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 ANKRD33Q7Z3H0 272 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 SLF1Q9BQI6 1058 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.84□□□□□ -1.15
HOXD8-202ENST00000429017 GOPCQ9HD26 462 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 TMEM39AQ9NV64 488 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 NYAP2Q9P242 653 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 TBX21Q9UL17 535 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 DDX19BQ9UMR2 479 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 VCANP13611 3396 aa7.84□□□□□ -1.15
HOXD8-202ENST00000429017 SPTBN5Q9NRC6 3674 aaKnown RBP7.84□□□□□ -1.15
HOXD8-202ENST00000429017 MCM3APO60318 1980 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 CENPBP07199 599 aaPredicted RBP7.83□□□□□ -1.16
HOXD8-202ENST00000429017 FOSL2P15408 326 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 DGKGP49619 791 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 CDK7P50613 346 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 FPGSQ05932 587 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 TSHZ3Q63HK5 1081 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 TAS1R3Q7RTX0 852 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 CPXCR1Q8N123 301 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 GOLGA6L1Q8N7Z2 621 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 TOX2Q96NM4 488 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.83□□□□□ -1.16
HOXD8-202ENST00000429017 TEX13BQ9BXU2 312 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 KATNBL1Q9H079 304 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 RAVER2Q9HCJ3 691 aaKnown RBP7.83□□□□□ -1.16
HOXD8-202ENST00000429017 PRDM6Q9NQX0 595 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 STARD7Q9NQZ5 370 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 ARPP21Q9UBL0 812 aaPredicted RBP7.83□□□□□ -1.16
HOXD8-202ENST00000429017 CLIP2Q9UDT6 1046 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 ZHX1Q9UKY1 873 aaPredicted RBP7.83□□□□□ -1.16
HOXD8-202ENST00000429017 FAM184BQ9ULE4 1060 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 SYNGAP1Q96PV0 1343 aa7.83□□□□□ -1.16
HOXD8-202ENST00000429017 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.82□□□□□ -1.16
HOXD8-202ENST00000429017 GRXCR1A8MXD5 290 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 MINDY4BA8MYZ0 360 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 M0R2C6 588 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 ATP2A1O14983 1001 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 PRDM1O75626 825 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 TIMP1P01033 207 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 COPB2P35606 906 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 ACVR2BQ13705 512 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 TMEM240Q5SV17 173 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 AMOTL1Q8IY63 956 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 MSL3Q8N5Y2 521 aaKnown RBP7.82□□□□□ -1.16
HOXD8-202ENST00000429017 DDX11Q96FC9 970 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 UPF3AQ9H1J1 476 aaKnown RBP7.82□□□□□ -1.16
HOXD8-202ENST00000429017 SLC38A10Q9HBR0 1119 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 NDFIP2Q9NV92 336 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 CNPY2Q9Y2B0 182 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 DDX49Q9Y6V7 483 aaKnown RBP7.82□□□□□ -1.16
HOXD8-202ENST00000429017 ASTN1O14525 1302 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 PRUNE2Q8WUY3 3088 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 MYH4Q9Y623 1939 aa7.82□□□□□ -1.16
HOXD8-202ENST00000429017 TMEM265A0A087WTH1 108 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.81□□□□□ -1.16
HOXD8-202ENST00000429017 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.81□□□□□ -1.16
HOXD8-202ENST00000429017 DCDC2CA8MYV0 355 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 GNB5O14775 395 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 DUSP11O75319 330 aaKnown RBP7.81□□□□□ -1.16
HOXD8-202ENST00000429017 ASGR1P07306 291 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 CST5P28325 142 aaPredicted RBP7.81□□□□□ -1.16
HOXD8-202ENST00000429017 SCTRP47872 440 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 CNTN2Q02246 1040 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 CCDC144BQ3MJ40 725 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 TMEM63BQ5T3F8 832 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 RASIP1Q5U651 963 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 ZSCAN25Q6NSZ9 544 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 ARMCX2Q7L311 632 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 LRRC47Q8N1G4 583 aaKnown RBP7.81□□□□□ -1.16
HOXD8-202ENST00000429017 KBTBD3Q8NAB2 608 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 PRPF38AQ8NAV1 312 aaKnown RBP7.81□□□□□ -1.16
HOXD8-202ENST00000429017 APPBP2Q92624 585 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 MKL1Q969V6 931 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 CEP95Q96GE4 821 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 DDRGK1Q96HY6 314 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 LRRCC1Q9C099 1032 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 MKNK2Q9HBH9 465 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 MTMR4Q9NYA4 1195 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 ARVCFO00192 962 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 GPAA1O43292 621 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 ZBED4O75132 1171 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 C6orf222P0C671 652 aaPredicted RBP7.81□□□□□ -1.16
HOXD8-202ENST00000429017 ACRP10323 421 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 CSF2RAP15509 400 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 GJA9P57773 515 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 BEX3Q00994 111 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 FOXD4L6Q3SYB3 417 aaPredicted RBP7.81□□□□□ -1.16
HOXD8-202ENST00000429017 MFSD5Q6N075 450 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 GIMAP6Q6P9H5 292 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 FOXD4L3Q6VB84 417 aaPredicted RBP7.81□□□□□ -1.16
HOXD8-202ENST00000429017 RASGRP2Q7LDG7 609 aa7.81□□□□□ -1.16
HOXD8-202ENST00000429017 FAM126BQ8IXS8 530 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms