RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 GGPS1O95749 300 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 ITGB5P18084 799 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 ICAM3P32942 547 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 EPHB4P54760 987 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 HSDL1Q3SXM5 330 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 CELF3Q5SZQ8 465 aaKnown RBP12.33□□□□□ -0.44
ATG4B-210ENST00000428861 CYP2W1Q8TAV3 490 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 AIFM3Q96NN9 605 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 KIF2CQ99661 725 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 MTG1Q9BT17 334 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-210ENST00000428861 RNF26Q9BY78 433 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-210ENST00000428861 ALDH8A1Q9H2A2 487 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-210ENST00000428861 TMEM39AQ9NV64 488 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 POLR3EQ9NVU0 708 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 SCN10AQ9Y5Y9 1956 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 DCDC2CA8MYV0 355 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 hCG_1984214I3L0E3 225 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 CTDNEP1O95476 244 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 HOXD8P13378 290 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-210ENST00000428861 FXR1P51114 621 aaKnown RBP eCLIP12.32□□□□□ -0.44
ATG4B-210ENST00000428861 ADCY7P51828 1080 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 LAMC2Q13753 1193 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 NBPF20Q3BBV1 942 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 JAKMIP3Q5VZ66 844 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 DHX37Q8IY37 1157 aaKnown RBP12.32□□□□□ -0.44
ATG4B-210ENST00000428861 ZNF713Q8N859 430 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-210ENST00000428861 PPTC7Q8NI37 304 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 RASGRP4Q8TDF6 673 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 ANO3Q9BYT9 981 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 ZMYND12Q9H0C1 365 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 TRMT13Q9NUP7 481 aaKnown RBP12.32□□□□□ -0.44
ATG4B-210ENST00000428861 VPS54Q9P1Q0 977 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 UBIAD1Q9Y5Z9 338 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 UMODL1Q5DID0 1318 aa12.32□□□□□ -0.44
ATG4B-210ENST00000428861 SOX1O00570 391 aaPredicted RBP12.31□□□□□ -0.44
ATG4B-210ENST00000428861 FIBPO43427 364 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 EDIL3O43854 480 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 PFKFB2O60825 505 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 STAM2O75886 525 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 ZNF286BP0CG31 522 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 TGFB3P10600 412 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 ST3GAL1Q11201 340 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 ME3Q16798 604 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 XRRA1Q6P2D8 792 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 KCNV1Q6PIU1 500 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 CYFIP1Q7L576 1253 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 NECAB1Q8N987 351 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 SPATA33Q96N06 139 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 UBE2OQ9C0C9 1292 aaKnown RBP12.31□□□□□ -0.44
ATG4B-210ENST00000428861 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 MROH7Q68CQ1 1323 aa12.31□□□□□ -0.44
ATG4B-210ENST00000428861 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 KPNA6O60684 536 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 TIMP1P01033 207 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 RAG1P15918 1043 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 KCNA2P16389 499 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 NEK4P51957 841 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 CHMP4BP1P59074 171 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 SSRP1Q08945 709 aaKnown RBP12.3□□□□□ -0.44
ATG4B-210ENST00000428861 HIC1Q14526 733 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 NPY5RQ15761 445 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 DGKDQ16760 1214 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 GNPTABQ3T906 1256 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 BRDTQ58F21 947 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-210ENST00000428861 C9orf50Q5SZB4 431 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 CRYGNQ8WXF5 182 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 CTAGE1Q96RT6 745 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 LBHD1Q9BQE6 289 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-210ENST00000428861 C16orf70Q9BSU1 422 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 PPP1R12CQ9BZL4 782 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 JADE2Q9NQC1 790 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 PKD2L1Q9P0L9 805 aa12.3□□□□□ -0.44
ATG4B-210ENST00000428861 MYH7BA7E2Y1 1941 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 HAS3O00219 553 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 F2P00734 622 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 ARP10275 920 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 CYP2C9P11712 490 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 CYP2C18P33260 490 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 SREBF1P36956 1147 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 PSEN2P49810 448 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 AKAP17AQ02040 695 aaKnown RBP12.29□□□□□ -0.44
ATG4B-210ENST00000428861 FAM47CQ5HY64 1035 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 NFRKBQ6P4R8 1299 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 METTL7BQ6UX53 244 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 C16orf59Q7L2K0 433 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 NLRX1Q86UT6 975 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 TDHQ8IZJ6 230 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 GPRASP2Q96D09 838 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 VWCEQ96DN2 955 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 GPR20Q99678 358 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 SENP7Q9BQF6 1050 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 MXRA8Q9BRK3 442 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 NOC4LQ9BVI4 516 aaKnown RBP12.29□□□□□ -0.44
ATG4B-210ENST00000428861 SLKQ9H2G2 1235 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-210ENST00000428861 MLXIPQ9HAP2 919 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 GJB4Q9NTQ9 266 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 DOCK5Q9H7D0 1870 aa12.29□□□□□ -0.44
ATG4B-210ENST00000428861 LAMA2P24043 3122 aaKnown RBP12.28□□□□□ -0.44
ATG4B-210ENST00000428861 A0A1W2PPC1 479 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms