RNA–Protein interactions for RNA: ENST00000428575.6

XRCC6-206, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2 BASIC

Gene XRCC6, Length 2,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-206ENST00000428575 CAVIN3Q969G5 261 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 PIGSQ96S52 555 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 IDI2Q9BXS1 227 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 PDGFDQ9GZP0 370 aaPredicted RBP12.37□□□□□ -0.43
XRCC6-206ENST00000428575 UBA5Q9GZZ9 404 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 ZMYND12Q9H0C1 365 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 EPN3Q9H201 632 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 LIMA1Q9UHB6 759 aaKnown RBP12.37□□□□□ -0.43
XRCC6-206ENST00000428575 ZNF646O15015 1829 aaPredicted RBP12.37□□□□□ -0.43
XRCC6-206ENST00000428575 C10orf71Q711Q0 1435 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 A0A087X0B3 334 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 KRT86O43790 486 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 RASSF9O75901 435 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 GNA11P29992 359 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 BAG6P46379 1132 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 NAP1L1P55209 391 aaKnown RBP12.37□□□□□ -0.43
XRCC6-206ENST00000428575 SLC8A3P57103 927 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 ERVK-24P63145 666 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 ARL6IP4Q66PJ3 421 aaKnown RBP12.37□□□□□ -0.43
XRCC6-206ENST00000428575 SAMD1Q6SPF0 538 aaPredicted RBP12.37□□□□□ -0.43
XRCC6-206ENST00000428575 GRAMD1CQ8IYS0 662 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 CNKSR2Q8WXI2 1034 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 RIN2Q8WYP3 895 aaPredicted RBP12.37□□□□□ -0.43
XRCC6-206ENST00000428575 CCDC17Q96LX7 622 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 MMS19Q96T76 1030 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 RIOX1Q9H6W3 641 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 FAM198AQ9UFP1 575 aa12.37□□□□□ -0.43
XRCC6-206ENST00000428575 EPN1Q9Y6I3 576 aaPredicted RBP12.37□□□□□ -0.43
XRCC6-206ENST00000428575 SMCO2A6NFE2 343 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 MYO1FO00160 1098 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 NDUFA10O95299 355 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 SNHG28P0DPA3 235 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 ATP2B2Q01814 1243 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 INF2Q27J81 1249 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 GRIPAP1Q4V328 841 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 HSP90AA4PQ58FG1 418 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 EP400NLQ6ZTU2 488 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 ZSCAN29Q8IWY8 852 aaPredicted RBP12.36□□□□□ -0.43
XRCC6-206ENST00000428575 CPLX3Q8WVH0 158 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 TRIM6Q9C030 488 aaPredicted RBP12.36□□□□□ -0.43
XRCC6-206ENST00000428575 ATP6V0A4Q9HBG4 840 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 PI4KBQ9UBF8 816 aa12.36□□□□□ -0.43
XRCC6-206ENST00000428575 LRRC10BA6NIK2 292 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 NPM3O75607 178 aaKnown RBP12.35□□□□□ -0.43
XRCC6-206ENST00000428575 FXR1P51114 621 aaKnown RBP eCLIP12.35□□□□□ -0.431e-7■■■□□ 17.5
XRCC6-206ENST00000428575 CUL4BQ13620 913 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 PPP2R5AQ15172 486 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 TSR1Q2NL82 804 aaKnown RBP12.35□□□□□ -0.43
XRCC6-206ENST00000428575 SND1Q7KZF4 910 aaKnown RBP eCLIP12.35□□□□□ -0.434e-7■□□□□ 9
XRCC6-206ENST00000428575 KRT25Q7Z3Z0 450 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 TTLL6Q8N841 843 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 C4orf32Q8N8J7 132 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 JAKMIP2Q96AA8 810 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 PYM1Q9BRP8 204 aaKnown RBP12.35□□□□□ -0.43
XRCC6-206ENST00000428575 GPCPD1Q9NPB8 672 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
XRCC6-206ENST00000428575 MYH4Q9Y623 1939 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 A0A0U1RQJ8 604 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 DDTLA6NHG4 134 aaPredicted RBP12.35□□□□□ -0.43
XRCC6-206ENST00000428575 YDJCA8MPS7 323 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 hCG_1984214I3L0E3 225 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 SCP2P22307 547 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 LONP1P36776 959 aaKnown RBP12.35□□□□□ -0.43
XRCC6-206ENST00000428575 ZNF543Q08ER8 600 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 IL17AQ16552 155 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 SKIDA1Q1XH10 827 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 DEFB132Q7Z7B7 95 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 ZNF713Q8N859 430 aaPredicted RBP12.35□□□□□ -0.43
XRCC6-206ENST00000428575 ATRIPQ8WXE1 791 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 PAGE5Q96GU1 130 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 FAXDC2Q96IV6 333 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 GSDMAQ96QA5 445 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 NUP88Q99567 741 aaPredicted RBP12.35□□□□□ -0.43
XRCC6-206ENST00000428575 SLF1Q9BQI6 1058 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 TSGA10Q9BZW7 698 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 DNAJC18Q9H819 358 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 BATF3Q9NR55 127 aa12.35□□□□□ -0.43
XRCC6-206ENST00000428575 ESYT2A0FGR8 921 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 IPO7O95373 1038 aaKnown RBP12.34□□□□□ -0.43
XRCC6-206ENST00000428575 SLURP2P0DP57 97 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 AFMP43652 599 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 NONOQ15233 471 aaKnown RBP eCLIP12.34□□□□□ -0.43
XRCC6-206ENST00000428575 NBPF9Q3BBW0 867 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 NAA35Q5VZE5 725 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 SH3RF1Q7Z6J0 888 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 RTKN2Q8IZC4 609 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 ARFGAP2Q8N6H7 521 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 GUCA1BQ9UMX6 200 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 SAMM50Q9Y512 469 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 SIPA1L1O43166 1804 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 FAM196BA6NMK8 535 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 ATP1A1P05023 1023 aaKnown RBP12.34□□□□□ -0.43
XRCC6-206ENST00000428575 PRLRP16471 622 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 CYLC1P35663 651 aaPredicted RBP12.34□□□□□ -0.43
XRCC6-206ENST00000428575 ICA1Q05084 483 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
XRCC6-206ENST00000428575 CERKLQ49MI3 558 aaPredicted RBP12.34□□□□□ -0.43
XRCC6-206ENST00000428575 GLE1Q53GS7 698 aaKnown RBP12.34□□□□□ -0.43
XRCC6-206ENST00000428575 GPATCH4Q5T3I0 446 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms