RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 PARD6BQ9BYG5 372 aa22.34■■□□□ 1.17
PMPCB-202ENST00000428154 GBP3Q9H0R5 595 aa22.34■■□□□ 1.17
PMPCB-202ENST00000428154 PANK4Q9NVE7 773 aa22.34■■□□□ 1.17
PMPCB-202ENST00000428154 SIK3Q9Y2K2 1263 aa22.34■■□□□ 1.17
PMPCB-202ENST00000428154 F5H6K3 240 aa22.33■■□□□ 1.17
PMPCB-202ENST00000428154 ERLIN1O75477 346 aa22.33■■□□□ 1.17
PMPCB-202ENST00000428154 AMPD2Q01433 879 aa22.33■■□□□ 1.17
PMPCB-202ENST00000428154 KLRC3Q07444 240 aa22.33■■□□□ 1.17
PMPCB-202ENST00000428154 CCDC122Q5T0U0 273 aa22.33■■□□□ 1.17
PMPCB-202ENST00000428154 LRRC55Q6ZSA7 311 aa22.33■■□□□ 1.17
PMPCB-202ENST00000428154 FAM20AQ96MK3 541 aa22.33■■□□□ 1.17
PMPCB-202ENST00000428154 AGPAT5Q9NUQ2 364 aa22.33■■□□□ 1.17
PMPCB-202ENST00000428154 RAB21Q9UL25 225 aa22.33■■□□□ 1.17
PMPCB-202ENST00000428154 MARSP56192 900 aaKnown RBP22.32■■□□□ 1.16
PMPCB-202ENST00000428154 HERVK_113P62684 666 aa22.32■■□□□ 1.16
PMPCB-202ENST00000428154 SPA17Q15506 151 aa22.32■■□□□ 1.16
PMPCB-202ENST00000428154 ZCWPW2Q504Y3 356 aa22.32■■□□□ 1.16
PMPCB-202ENST00000428154 ZNF772Q68DY9 489 aaPredicted RBP22.32■■□□□ 1.16
PMPCB-202ENST00000428154 KCNK18Q7Z418 384 aa22.32■■□□□ 1.16
PMPCB-202ENST00000428154 FBXO11Q86XK2 927 aa22.32■■□□□ 1.16
PMPCB-202ENST00000428154 MSL3Q8N5Y2 521 aaKnown RBP22.32■■□□□ 1.16
PMPCB-202ENST00000428154 JAKMIP2Q96AA8 810 aa22.32■■□□□ 1.16
PMPCB-202ENST00000428154 HERC5Q9UII4 1024 aaKnown RBP22.32■■□□□ 1.16
PMPCB-202ENST00000428154 GUCA1BQ9UMX6 200 aa22.32■■□□□ 1.16
PMPCB-202ENST00000428154 A0A0U1RQJ8 604 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 MEIS2O14770 477 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 USO1O60763 962 aaKnown RBP22.31■■□□□ 1.16
PMPCB-202ENST00000428154 PLA2G4BP0C869 781 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 CIITAP33076 1130 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 TCP10Q12799 353 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 RBM26Q5T8P6 1007 aaKnown RBP22.31■■□□□ 1.16
PMPCB-202ENST00000428154 SYDE2Q5VT97 1194 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 SH3BP5LQ7L8J4 393 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 ATRIPQ8WXE1 791 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 CCDC42Q96M95 316 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 COL4A3BPQ9Y5P4 624 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 SCN9AQ15858 1988 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 FRMD3A2A2Y4 597 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 LCA5LO95447 670 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 SREBF1P36956 1147 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 VAV2P52735 878 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 ARHGAP4P98171 946 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 CKAP4Q07065 602 aaKnown RBP22.31■■□□□ 1.16
PMPCB-202ENST00000428154 PAPD7Q5XG87 772 aaKnown RBP22.31■■□□□ 1.16
PMPCB-202ENST00000428154 TRAPPC11Q7Z392 1133 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 FAM184BQ9ULE4 1060 aa22.31■■□□□ 1.16
PMPCB-202ENST00000428154 SPDYE3A6NKU9 549 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 USP17L15C9J2P7 530 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 USP17L13C9JLJ4 530 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 USP17L11C9JVI0 530 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 USP17L18D6R9N7 530 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 USP17L22D6RA61 530 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 USP17L17D6RBQ6 530 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 USP17L19D6RCP7 530 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 USP17L20D6RJB6 530 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 BMP3P12645 472 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 MCM3P25205 808 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 USP17L24Q0WX57 530 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 KIF5AQ12840 1032 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 USP17L6PQ6QN14 398 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 SIAH1Q8IUQ4 282 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 SYN2Q92777 582 aaPredicted RBP22.3■■□□□ 1.16
PMPCB-202ENST00000428154 HPS3Q969F9 1004 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 PURBQ96QR8 312 aaKnown RBP22.3■■□□□ 1.16
PMPCB-202ENST00000428154 KIAA1024Q9UPX6 916 aa22.3■■□□□ 1.16
PMPCB-202ENST00000428154 PIK3CDO00329 1044 aa22.29■■□□□ 1.16
PMPCB-202ENST00000428154 CYP3A4P08684 503 aa22.29■■□□□ 1.16
PMPCB-202ENST00000428154 ECM1Q16610 540 aa22.29■■□□□ 1.16
PMPCB-202ENST00000428154 EDRF1Q3B7T1 1238 aa22.29■■□□□ 1.16
PMPCB-202ENST00000428154 ZC3H3Q8IXZ2 948 aaKnown RBP22.29■■□□□ 1.16
PMPCB-202ENST00000428154 SLX4Q8IY92 1834 aa22.29■■□□□ 1.16
PMPCB-202ENST00000428154 PSME4Q14997 1843 aa22.29■■□□□ 1.16
PMPCB-202ENST00000428154 NDUFB10O96000 172 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 RPA1P27694 616 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 NEK11Q8NG66 645 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 ETNPPLQ8TBG4 499 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 TMOD2Q9NZR1 351 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 SAR1BQ9Y6B6 198 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 SSU72P8A0A1W2PR75 194 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 GPBP1Q86WP2 473 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 C7orf43Q8WVR3 580 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 ZMYND15Q9H091 742 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 KCNQ5Q9NR82 932 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 PUF60Q9UHX1 559 aaKnown RBP22.28■■□□□ 1.16
PMPCB-202ENST00000428154 PCDHA2Q9Y5H9 948 aa22.28■■□□□ 1.16
PMPCB-202ENST00000428154 CYP11B2P19099 503 aa22.27■■□□□ 1.16
PMPCB-202ENST00000428154 TRIM58Q8NG06 486 aa22.27■■□□□ 1.16
PMPCB-202ENST00000428154 MMRN2Q9H8L6 949 aa22.27■■□□□ 1.16
PMPCB-202ENST00000428154 ARHGEF10LQ9HCE6 1279 aa22.27■■□□□ 1.16
PMPCB-202ENST00000428154 DNM3Q9UQ16 869 aa22.27■■□□□ 1.16
PMPCB-202ENST00000428154 ATAD5Q96QE3 1844 aa22.27■■□□□ 1.16
PMPCB-202ENST00000428154 TRAF5O00463 557 aa22.26■■□□□ 1.15
PMPCB-202ENST00000428154 RAD21O60216 631 aa22.26■■□□□ 1.15
PMPCB-202ENST00000428154 TBC1D8O95759 1140 aa22.26■■□□□ 1.15
PMPCB-202ENST00000428154 KLK7P49862 253 aa22.26■■□□□ 1.15
PMPCB-202ENST00000428154 CACNB3P54284 484 aa22.26■■□□□ 1.15
PMPCB-202ENST00000428154 SLC12A3P55017 1021 aa22.26■■□□□ 1.15
PMPCB-202ENST00000428154 MAPK8IP2Q13387 824 aaPredicted RBP22.26■■□□□ 1.15
PMPCB-202ENST00000428154 CCDC40Q4G0X9 1142 aa22.26■■□□□ 1.15
PMPCB-202ENST00000428154 IQCEQ6IPM2 695 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms