RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 ZBTB41Q5SVQ8 909 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 MTMR6Q9Y217 621 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 PLEKHG1Q9ULL1 1385 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 S100BP04271 92 aaPredicted RBP14.33□□□□□ -0.12
SPG11-202ENST00000427534 PRPSAP1Q14558 356 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 SLC27A3Q5K4L6 730 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 TBC1D9BQ66K14 1250 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 OR6B3Q8NGW1 331 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 CNOT6LQ96LI5 555 aaKnown RBP14.33□□□□□ -0.12
SPG11-202ENST00000427534 DBNLQ9UJU6 430 aaKnown RBP14.33□□□□□ -0.12
SPG11-202ENST00000427534 IGSF1Q8N6C5 1336 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 DENND3A2RUS2 1198 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 ECE2O60344 883 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 RINT1Q6NUQ1 792 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 STAP2Q9UGK3 403 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 CC2D2BQ6DHV5 1058 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 CEP120Q8N960 986 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 TBK1Q9UHD2 729 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 WDR91A4D1P6 747 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 ARHGAP6O43182 974 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 NR2F2P24468 414 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 MMEL1Q495T6 779 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 GCNAQ96QF7 691 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 PIDD1Q9HB75 910 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 SFMBT1Q9UHJ3 866 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 RNF8O76064 485 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 TUBB2AQ13885 445 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 DCAF4L1Q3SXM0 396 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 TRIM68Q6AZZ1 485 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 ARFGAP2Q8N6H7 521 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 PPFIBP2Q8ND30 876 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 ATP2A3Q93084 1043 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 TUBB2BQ9BVA1 445 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 LSG1Q9H089 658 aaKnown RBP14.32□□□□□ -0.12
SPG11-202ENST00000427534 RCN2Q14257 317 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 EXOC3L4Q17RC7 722 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 TTC31Q49AM3 519 aaPredicted RBP14.32□□□□□ -0.12
SPG11-202ENST00000427534 KCTD6Q8NC69 237 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 NVLO15381 856 aaKnown RBP14.32□□□□□ -0.12
SPG11-202ENST00000427534 KCNQ2O43526 872 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 SOX5P35711 763 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 USP14P54578 494 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 AFG1LQ8WV93 481 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 COL4A3BPQ9Y5P4 624 aa14.32□□□□□ -0.12
SPG11-202ENST00000427534 PTPREP23469 700 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 MUM1L1Q5H9M0 696 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 LGSNQ5TDP6 509 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 FAM133AQ8N9E0 248 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 RRAGDQ9NQL2 400 aaPredicted RBP14.31□□□□□ -0.12
SPG11-202ENST00000427534 PDIA3P30101 505 aaKnown RBP14.31□□□□□ -0.12
SPG11-202ENST00000427534 ACCSLQ4AC99 568 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 ZCWPW1Q9H0M4 648 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 PLCB1Q9NQ66 1216 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.31□□□□□ -0.125e-7■■■□□ 18.9
SPG11-202ENST00000427534 OGFRQ9NZT2 677 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 KDM5DQ9BY66 1539 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 ATF2P15336 505 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 FBXW4P57775 412 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 RGS16O15492 202 aaPredicted RBP14.31□□□□□ -0.12
SPG11-202ENST00000427534 PEX3P56589 373 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 FAM26FQ5R3K3 315 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 RIC8AQ9NPQ8 531 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 RGS12O14924 1447 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 ATP7BP35670 1465 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 LRRC4Q9HBW1 653 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 EFCAB6Q5THR3 1501 aa14.31□□□□□ -0.12
SPG11-202ENST00000427534 KCTD16Q68DU8 428 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 RNF207Q6ZRF8 634 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 SLC44A5Q8NCS7 719 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.3□□□□□ -0.12
SPG11-202ENST00000427534 PCDHA4Q9UN74 947 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 ITM2BQ9Y287 266 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 KDELC2Q7Z4H8 507 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 SIX6OS1Q8N1H7 587 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 SPDL1Q96EA4 605 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 MXD3Q9BW11 206 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 PIH1D3Q9NQM4 214 aaKnown RBP14.3□□□□□ -0.12
SPG11-202ENST00000427534 ZNF215Q9UL58 517 aaPredicted RBP14.3□□□□□ -0.12
SPG11-202ENST00000427534 PCDHA7Q9UN72 937 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 CRKP46108 304 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 ARHGEF25Q86VW2 580 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 GJB4Q9NTQ9 266 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 KIAA1468Q9P260 1216 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 ADD3Q9UEY8 706 aaKnown RBP14.3□□□□□ -0.12
SPG11-202ENST00000427534 SERPINB13Q9UIV8 391 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 BASP1P80723 227 aaKnown RBP14.3□□□□□ -0.12
SPG11-202ENST00000427534 IQCB1Q15051 598 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 FEZ2Q9UHY8 353 aaPredicted RBP14.3□□□□□ -0.12
SPG11-202ENST00000427534 PLEKHA8P1O95397 391 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 KRT1P04264 644 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 CYP4F22Q6NT55 531 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 RNF139Q8WU17 664 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 MAP4K1Q92918 833 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 ELP3Q9H9T3 547 aa14.3□□□□□ -0.12
SPG11-202ENST00000427534 DARS2Q6PI48 645 aaKnown RBP14.29□□□□□ -0.12
SPG11-202ENST00000427534 CYFIP1Q7L576 1253 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 KRT26Q7Z3Y9 468 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 SYNMO15061 1565 aa14.29□□□□□ -0.12
SPG11-202ENST00000427534 USP17L5A8MUK1 530 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms