RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 CABP7Q86V35 215 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 FCHSD1Q86WN1 690 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 CPXCR1Q8N123 301 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 LENG9Q96B70 501 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 TRIM47Q96LD4 638 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 MMTAG2Q9BU76 263 aaKnown RBP20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 BIN1O00499 593 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 NFIBO00712 420 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 TBX3O15119 743 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 ECM2O94769 699 aaPredicted RBP20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 NAALADL2Q58DX5 795 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 LUZP1Q86V48 1076 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 MCF2L2Q86YR7 1114 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 ANP32BQ92688 251 aaKnown RBP20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 ZNF333Q96JL9 665 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 RAB34Q9BZG1 259 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 TTC12Q9H892 705 aaPredicted RBP20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 MAP3K20Q9NYL2 800 aaKnown RBP20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 CCDC39Q9UFE4 941 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 AGTPBP1Q9UPW5 1226 aa20.22■□□□□ 0.83
AC055811.2-201ENST00000427497 POTEFA5A3E0 1075 aa20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 FAM86B1E9PN63 330 aa20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 ATP2A1O14983 1001 aa20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 FAM86B2P0C5J1 330 aa20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 ALAS1P13196 640 aa20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 PRMT2P55345 433 aa20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 PROCA1Q8NCQ7 364 aaPredicted RBP20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 ETNPPLQ8TBG4 499 aa20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 PPP1R9BQ96SB3 815 aa20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 EHMT1Q9H9B1 1298 aa20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 LRWD1Q9UFC0 647 aa20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 CTDP1Q9Y5B0 961 aaPredicted RBP20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 MKI67P46013 3256 aaKnown RBP20.21■□□□□ 0.83
AC055811.2-201ENST00000427497 STAT6P42226 847 aa20.2■□□□□ 0.82
AC055811.2-201ENST00000427497 DPYDQ12882 1025 aa20.2■□□□□ 0.82
AC055811.2-201ENST00000427497 MUM1L1Q5H9M0 696 aa20.2■□□□□ 0.82
AC055811.2-201ENST00000427497 RRAGBQ5VZM2 374 aa20.2■□□□□ 0.82
AC055811.2-201ENST00000427497 SMARCE1Q969G3 411 aa20.2■□□□□ 0.82
AC055811.2-201ENST00000427497 MTRQ99707 1265 aa20.2■□□□□ 0.82
AC055811.2-201ENST00000427497 BPIFA3Q9BQP9 254 aa20.2■□□□□ 0.82
AC055811.2-201ENST00000427497 NAT10Q9H0A0 1025 aaKnown RBP20.2■□□□□ 0.82
AC055811.2-201ENST00000427497 HOXC10Q9NYD6 342 aa20.2■□□□□ 0.82
AC055811.2-201ENST00000427497 MAN1B1Q9UKM7 699 aa20.2■□□□□ 0.82
AC055811.2-201ENST00000427497 IGLV3-22A0A075B6J6 115 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 AFMP43652 599 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 CCDC173Q0VFZ6 552 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 PRR16Q569H4 304 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 TREML2Q5T2D2 321 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 SLFN12Q8IYM2 578 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 TRIML1Q8N9V2 468 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 PDLIM2Q96JY6 352 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 CUEDC2Q9H467 287 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 SRRDQ9UH36 339 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 ZNF214Q9UL59 606 aaPredicted RBP20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 PCDHA12Q9UN75 941 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 RPTORQ8N122 1335 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 A0A0G2JMZ2 1700 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 SPDYE16A6NNV3 312 aaPredicted RBP20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 SMC2O95347 1197 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 OSBPP22059 807 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 SMCR8Q8TEV9 937 aaPredicted RBP20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 LRRC15Q8TF66 581 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 COL20A1Q9P218 1284 aa20.19■□□□□ 0.82
AC055811.2-201ENST00000427497 POTEMA6NI47 508 aa20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 GTPBP6O43824 516 aaPredicted RBP20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 PLCG1P19174 1290 aa20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 BMP6P22004 513 aa20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 HOXD10P28358 340 aa20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 MORC3Q14149 939 aa20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 DHX40Q8IX18 779 aaKnown RBP20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 SH3TC2Q8TF17 1288 aa20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 FAM20AQ96MK3 541 aa20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 TRERF1Q96PN7 1200 aa20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 MAGEF1Q9HAY2 307 aa20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 PNMA3Q9UL41 463 aa20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 RABGAP1Q9Y3P9 1069 aa20.18■□□□□ 0.82
AC055811.2-201ENST00000427497 FRMPD4Q14CM0 1322 aa20.17■□□□□ 0.82
AC055811.2-201ENST00000427497 MARCH6O60337 910 aa20.17■□□□□ 0.82
AC055811.2-201ENST00000427497 HOXA7P31268 230 aaPredicted RBP20.17■□□□□ 0.82
AC055811.2-201ENST00000427497 TMEM132BQ14DG7 1078 aa20.17■□□□□ 0.82
AC055811.2-201ENST00000427497 ISM2Q6H9L7 571 aa20.17■□□□□ 0.82
AC055811.2-201ENST00000427497 RASSF8Q8NHQ8 419 aa20.17■□□□□ 0.82
AC055811.2-201ENST00000427497 GJA10Q969M2 543 aa20.17■□□□□ 0.82
AC055811.2-201ENST00000427497 GSDMAQ96QA5 445 aa20.17■□□□□ 0.82
AC055811.2-201ENST00000427497 HOMER2Q9NSB8 354 aa20.17■□□□□ 0.82
AC055811.2-201ENST00000427497 KBTBD4Q9NVX7 518 aa20.17■□□□□ 0.82
AC055811.2-201ENST00000427497 RIPK3Q9Y572 518 aa20.17■□□□□ 0.82
AC055811.2-201ENST00000427497 ZNF76P36508 570 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 FCGRTP55899 365 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 SPIRE1Q08AE8 756 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 GRB10Q13322 594 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 CYP2W1Q8TAV3 490 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 SYTL5Q8TDW5 730 aaPredicted RBP20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 CALML4Q96GE6 196 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 TMEM106CQ9BVX2 250 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 RNF146Q9NTX7 359 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 MSH4O15457 936 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 SLC26A4O43511 780 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 MYL1P05976 194 aa20.16■□□□□ 0.82
AC055811.2-201ENST00000427497 CASP1P29466 404 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms