RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 GJA8P48165 433 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 KCNC1P48547 511 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 VWA3BQ502W6 1294 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 LZTR1Q8N653 840 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 NETO2Q8NC67 525 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 FNIP1Q8TF40 1166 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 KLHL6Q8WZ60 621 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 ALG3Q92685 438 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 TSPAN17Q96FV3 270 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 FGD4Q96M96 766 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 SUSD2Q9UGT4 822 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 PLA2G2DQ9UNK4 145 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 PMF1-BGLAPU3KQ54 211 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 TNRQ92752 1358 aa8.09□□□□□ -1.12
C9orf3-205ENST00000427193 SYCP2Q9BX26 1530 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 CCDC141Q6ZP82 1450 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
C9orf3-205ENST00000427193 ASGR2P07307 311 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 CELA3BP08861 270 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 SLURP1P55000 103 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 CASP7P55210 303 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 HTRA3P83110 453 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 DPY19L1Q2PZI1 675 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 GGT6Q6P531 493 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 THEMISQ8N1K5 641 aaPredicted RBP8.08□□□□□ -1.12
C9orf3-205ENST00000427193 SHDQ96IW2 340 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 NUDT5Q9UKK9 219 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.08□□□□□ -1.12
C9orf3-205ENST00000427193 RTEL1-TNFRSF6BF6WH68 1400 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 MAST1Q9Y2H9 1570 aa8.08□□□□□ -1.12
C9orf3-205ENST00000427193 HFM1A2PYH4 1435 aa8.07□□□□□ -1.12
C9orf3-205ENST00000427193 PAMP19021 973 aa8.07□□□□□ -1.12
C9orf3-205ENST00000427193 HNRNPMP52272 730 aaKnown RBP eCLIP8.07□□□□□ -1.12
C9orf3-205ENST00000427193 SLC9A5Q14940 896 aa8.07□□□□□ -1.12
C9orf3-205ENST00000427193 PPP2R5EQ16537 467 aa8.07□□□□□ -1.12
C9orf3-205ENST00000427193 SKOR2Q2VWA4 1001 aaPredicted RBP8.07□□□□□ -1.12
C9orf3-205ENST00000427193 SAPCD2Q86UD0 394 aa8.07□□□□□ -1.12
C9orf3-205ENST00000427193 NT5DC4Q86YG4 428 aa8.07□□□□□ -1.12
C9orf3-205ENST00000427193 PEX11GQ96HA9 241 aa8.07□□□□□ -1.12
C9orf3-205ENST00000427193 SUGT1Q9Y2Z0 365 aa8.07□□□□□ -1.12
C9orf3-205ENST00000427193 RWDD3Q9Y3V2 267 aa8.07□□□□□ -1.12
C9orf3-205ENST00000427193 PLXNC1O60486 1568 aa8.06□□□□□ -1.12
C9orf3-205ENST00000427193 NAIPQ13075 1403 aa8.06□□□□□ -1.12
C9orf3-205ENST00000427193 SH3D21A4FU49 640 aa8.06□□□□□ -1.12
C9orf3-205ENST00000427193 NASPP49321 788 aaPredicted RBP8.06□□□□□ -1.12
C9orf3-205ENST00000427193 FAM50AQ14320 339 aaKnown RBP8.06□□□□□ -1.12
C9orf3-205ENST00000427193 LIPIQ6XZB0 460 aa8.06□□□□□ -1.12
C9orf3-205ENST00000427193 B3GNT8Q7Z7M8 397 aa8.06□□□□□ -1.12
C9orf3-205ENST00000427193 ADAM7Q9H2U9 754 aa8.06□□□□□ -1.12
C9orf3-205ENST00000427193 IQGAP1P46940 1657 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 NPHP3-ACAD11A0A0J9YXS1 232 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 ANKRD34BA5PLL1 514 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 MC3RP41968 323 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 HDLBPQ00341 1268 aaKnown RBP8.05□□□□□ -1.12
C9orf3-205ENST00000427193 ZNF772Q68DY9 489 aaPredicted RBP8.05□□□□□ -1.12
C9orf3-205ENST00000427193 KIAA1211LQ6NV74 962 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 CPNE8Q86YQ8 564 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 CPLX3Q8WVH0 158 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 CPA5Q8WXQ8 436 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 SEC16BQ96JE7 1060 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 MTA3Q9BTC8 594 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 FBLN5Q9UBX5 448 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 A2MP01023 1474 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 STRCP1A6NGW2 1772 aa8.05□□□□□ -1.12
C9orf3-205ENST00000427193 SPAG9O60271 1321 aaKnown RBP8.04□□□□□ -1.12
C9orf3-205ENST00000427193 NPHS1O60500 1241 aa8.04□□□□□ -1.12
C9orf3-205ENST00000427193 ZBTB7AO95365 584 aa8.04□□□□□ -1.12
C9orf3-205ENST00000427193 PMLP29590 882 aa8.04□□□□□ -1.12
C9orf3-205ENST00000427193 VHLLQ6RSH7 139 aa8.04□□□□□ -1.12
C9orf3-205ENST00000427193 CRACR2BQ8N4Y2 399 aaPredicted RBP8.04□□□□□ -1.12
C9orf3-205ENST00000427193 ZNF513Q8N8E2 541 aaPredicted RBP8.04□□□□□ -1.12
C9orf3-205ENST00000427193 PCGF6Q9BYE7 350 aa8.04□□□□□ -1.12
C9orf3-205ENST00000427193 RXFP1Q9HBX9 757 aa8.04□□□□□ -1.12
C9orf3-205ENST00000427193 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.04□□□□□ -1.12
C9orf3-205ENST00000427193 GULP1Q9UBP9 304 aa8.04□□□□□ -1.12
C9orf3-205ENST00000427193 STRIP2Q9ULQ0 834 aa8.04□□□□□ -1.12
C9orf3-205ENST00000427193 INO80Q9ULG1 1556 aaPredicted RBP8.04□□□□□ -1.12
C9orf3-205ENST00000427193 CROCC2H7BZ55 1655 aa8.04□□□□□ -1.12
C9orf3-205ENST00000427193 FAM135AQ9P2D6 1515 aa8.03□□□□□ -1.12
C9orf3-205ENST00000427193 NLRP1Q9C000 1473 aa8.03□□□□□ -1.12
C9orf3-205ENST00000427193 CDK12Q9NYV4 1490 aaPredicted RBP8.03□□□□□ -1.12
C9orf3-205ENST00000427193 JCADQ9P266 1359 aa8.03□□□□□ -1.12
C9orf3-205ENST00000427193 PPP1R11O60927 126 aaPredicted RBP8.03□□□□□ -1.12
C9orf3-205ENST00000427193 NAT2P11245 290 aa8.03□□□□□ -1.12
C9orf3-205ENST00000427193 ZNF143P52747 638 aaPredicted RBP8.03□□□□□ -1.12
C9orf3-205ENST00000427193 ZFYVE27Q5T4F4 411 aa8.03□□□□□ -1.12
C9orf3-205ENST00000427193 WWC2Q6AWC2 1192 aa8.03□□□□□ -1.12
C9orf3-205ENST00000427193 POMZP3Q6PJE2 187 aa8.03□□□□□ -1.12
C9orf3-205ENST00000427193 PRRT2Q7Z6L0 340 aaPredicted RBP8.03□□□□□ -1.12
C9orf3-205ENST00000427193 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
C9orf3-205ENST00000427193 AKT3Q9Y243 479 aa8.03□□□□□ -1.12
C9orf3-205ENST00000427193 KDM5DQ9BY66 1539 aa8.03□□□□□ -1.12
C9orf3-205ENST00000427193 PZPP20742 1482 aa8.02□□□□□ -1.13
C9orf3-205ENST00000427193 C7orf72A4D263 438 aa8.02□□□□□ -1.13
C9orf3-205ENST00000427193 DLX2Q07687 328 aaPredicted RBP8.02□□□□□ -1.13
C9orf3-205ENST00000427193 DBX2Q6ZNG2 339 aa8.02□□□□□ -1.13
C9orf3-205ENST00000427193 USP33Q8TEY7 942 aa8.02□□□□□ -1.13
C9orf3-205ENST00000427193 ZNF526Q8TF50 670 aaPredicted RBP8.02□□□□□ -1.13
C9orf3-205ENST00000427193 MRRFQ96E11 262 aaKnown RBP8.02□□□□□ -1.13
C9orf3-205ENST00000427193 EMC9Q9Y3B6 208 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms