RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 XKR9Q5GH70 373 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 TRMT44Q8IYL2 757 aaKnown RBP15.59■□□□□ 0.09
PTPN13-203ENST00000427191 SNX5Q9Y5X3 404 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 CSADQ9Y600 493 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 ZNF790Q6PG37 636 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 IP6K1Q92551 441 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 H3BRJ5 948 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 CIITAP33076 1130 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 LRMPQ12912 555 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 TRIM59Q8IWR1 403 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 KIRREL3Q8IZU9 778 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 PDIK1LQ8N165 341 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 CNOT6LQ96LI5 555 aaKnown RBP15.59■□□□□ 0.09
PTPN13-203ENST00000427191 TUBGCP2Q9BSJ2 902 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 DISC1Q9NRI5 854 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 COL17A1Q9UMD9 1497 aaPredicted RBP15.59■□□□□ 0.09
PTPN13-203ENST00000427191 GNPATO15228 680 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 KIF1CO43896 1103 aaKnown RBP15.59■□□□□ 0.09
PTPN13-203ENST00000427191 AFPP02771 609 aaKnown RBP15.59■□□□□ 0.09
PTPN13-203ENST00000427191 NR1D1P20393 614 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 DNAAF3Q8N9W5 541 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 CHCHD3Q9NX63 227 aaKnown RBP15.59■□□□□ 0.09
PTPN13-203ENST00000427191 PCDHB4Q9Y5E5 795 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 SYNGAP1Q96PV0 1343 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 SRGAP2CP0DJJ0 459 aa15.58■□□□□ 0.09
PTPN13-203ENST00000427191 NSMFQ6X4W1 530 aa15.58■□□□□ 0.09
PTPN13-203ENST00000427191 PGBD1Q96JS3 809 aa15.58■□□□□ 0.09
PTPN13-203ENST00000427191 ING2Q9H160 280 aa15.58■□□□□ 0.09
PTPN13-203ENST00000427191 PTPN22Q9Y2R2 807 aa15.58■□□□□ 0.09
PTPN13-203ENST00000427191 NBPF3Q9H094 633 aa15.58■□□□□ 0.09
PTPN13-203ENST00000427191 H0YIN7 160 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 PMLP29590 882 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 ARHGEF6Q15052 776 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 MAN2A1Q16706 1144 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 GPATCH4Q5T3I0 446 aaKnown RBP15.58■□□□□ 0.08
PTPN13-203ENST00000427191 C4orf50Q6ZRC1 276 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 DEPDC1BQ8WUY9 529 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 OTUB1Q96FW1 271 aaPredicted RBP15.58■□□□□ 0.08
PTPN13-203ENST00000427191 ADCY9O60503 1353 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 CCDC188H7C350 402 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 KAZNQ674X7 775 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 STX18Q9P2W9 335 aaKnown RBP15.58■□□□□ 0.08
PTPN13-203ENST00000427191 TRPA1O75762 1119 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 APOA1P02647 267 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 CCDC92Q53HC0 331 aaPredicted RBP15.58■□□□□ 0.08
PTPN13-203ENST00000427191 SPARCL1Q14515 664 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 TMED2Q15363 201 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 SESTD1Q86VW0 696 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 OPTNQ96CV9 577 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 GCKRQ14397 625 aa15.58■□□□□ 0.08
PTPN13-203ENST00000427191 WDR75Q8IWA0 830 aaKnown RBP15.58■□□□□ 0.08
PTPN13-203ENST00000427191 SPDYE2BA6NHP3 402 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 SPDYE6P0CI01 402 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 KIF22Q14807 665 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 ARHGEF25Q86VW2 580 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 NIM1KQ8IY84 436 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 DESI2Q9BSY9 194 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 CAPN11Q9UMQ6 739 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 NCKAP5LQ9HCH0 1330 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 CCDC78A2IDD5 438 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 ASPRV1Q53RT3 343 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 ZMYND12Q9H0C1 365 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 SLC38A10Q9HBR0 1119 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 POLR3EQ9NVU0 708 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 GTPBP10A4D1E9 387 aaKnown RBP15.57■□□□□ 0.08
PTPN13-203ENST00000427191 HNRNPRO43390 633 aaKnown RBP15.57■□□□□ 0.08
PTPN13-203ENST00000427191 SERPINI2O75830 405 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 AP2B1P63010 937 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 ACAD11Q709F0 780 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 SCG3Q8WXD2 468 aaKnown RBP15.57■□□□□ 0.08
PTPN13-203ENST00000427191 PANX2Q96RD6 677 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 DLATP10515 647 aaKnown RBP15.57■□□□□ 0.08
PTPN13-203ENST00000427191 OCRLQ01968 901 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 HP1BP3Q5SSJ5 553 aaPredicted RBP15.57■□□□□ 0.08
PTPN13-203ENST00000427191 SPOPLQ6IQ16 392 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 KCTD6Q8NC69 237 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 TDRD7Q8NHU6 1098 aaKnown RBP15.57■□□□□ 0.08
PTPN13-203ENST00000427191 LZICQ8WZA0 190 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 RASSF7Q02833 373 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 LCA5Q86VQ0 697 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 USP6NLQ92738 828 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 ASPSCR1Q9BZE9 553 aa15.57■□□□□ 0.08
PTPN13-203ENST00000427191 FKBP3Q00688 224 aaKnown RBP15.56■□□□□ 0.08
PTPN13-203ENST00000427191 TFAP4Q01664 338 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 TBCCQ15814 346 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 PATL1Q86TB9 770 aaKnown RBP15.56■□□□□ 0.08
PTPN13-203ENST00000427191 RHOT2Q8IXI1 618 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 SNX25Q9H3E2 840 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 ZNF408Q9H9D4 720 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 UBN1Q9NPG3 1134 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 KPNA7A9QM74 516 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 NACC1Q96RE7 527 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 TRIM55Q9BYV6 548 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 RWDD2AQ9UIY3 292 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 HNRNPDLO14979 420 aaKnown RBP15.56■□□□□ 0.08
PTPN13-203ENST00000427191 PAPOLAP51003 745 aaKnown RBP15.56■□□□□ 0.08
PTPN13-203ENST00000427191 CHGBP05060 677 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 RSRC2Q7L4I2 434 aaKnown RBP15.56■□□□□ 0.08
PTPN13-203ENST00000427191 ZNF653Q96CK0 615 aa15.56■□□□□ 0.08
PTPN13-203ENST00000427191 ACCSQ96QU6 501 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms