RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 USP26Q9BXU7 913 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 IL23AQ9NPF7 189 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 FAM217BQ9NTX9 383 aaPredicted RBP12.38□□□□□ -0.43
LINC01238-202ENST00000426962 NAP1L2Q9ULW6 460 aaPredicted RBP12.38□□□□□ -0.43
LINC01238-202ENST00000426962 UMODL1Q5DID0 1318 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.37□□□□□ -0.43
LINC01238-202ENST00000426962 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.37□□□□□ -0.43
LINC01238-202ENST00000426962 FIBPO43427 364 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 FGBP02675 491 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 ACRP10323 421 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 HOXD8P13378 290 aaPredicted RBP12.37□□□□□ -0.43
LINC01238-202ENST00000426962 UBA1P22314 1058 aaKnown RBP12.37□□□□□ -0.43
LINC01238-202ENST00000426962 ADD1P35611 737 aaKnown RBP12.37□□□□□ -0.43
LINC01238-202ENST00000426962 CHMP4BP1P59074 171 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 APOBRQ0VD83 1088 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 NEDD9Q14511 834 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 HSDL1Q3SXM5 330 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 PSRC1Q6PGN9 363 aaPredicted RBP12.37□□□□□ -0.43
LINC01238-202ENST00000426962 ZNF365Q70YC5 407 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 NLRX1Q86UT6 975 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 SESTD1Q86VW0 696 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 TEX2Q8IWB9 1127 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 GPKOWQ92917 476 aaPredicted RBP eCLIP12.37□□□□□ -0.43
LINC01238-202ENST00000426962 BRF1Q92994 677 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 AGXT2Q9BYV1 514 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
LINC01238-202ENST00000426962 SPDYE3A6NKU9 549 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 hCG_1984214I3L0E3 225 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 HAS3O00219 553 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 SORBS3O60504 671 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 PSEN2P49810 448 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC01238-202ENST00000426962 NAPAP54920 295 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 PTGISQ16647 500 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 UBE2SQ16763 222 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 WWC2Q6AWC2 1192 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 Q7L0L9 218 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 ZNF713Q8N859 430 aaPredicted RBP12.36□□□□□ -0.43
LINC01238-202ENST00000426962 C7orf31Q8N865 590 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 RETREG2Q8NC44 543 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 PPP1R13LQ8WUF5 828 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 SENP7Q9BQF6 1050 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 WNT8AQ9H1J5 351 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 RIC8AQ9NPQ8 531 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 MTMR10Q9NXD2 777 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 PCDHA6Q9UN73 950 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 NOD1Q9Y239 953 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 PCDHA8Q9Y5H6 950 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 KIAA1217Q5T5P2 1943 aa12.36□□□□□ -0.43
LINC01238-202ENST00000426962 SMCO2A6NFE2 343 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 MAFGO15525 162 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 F2P00734 622 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 SEMA3FQ13275 785 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 BFSP2Q13515 415 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 MFSD10Q14728 455 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 KIAA0753Q2KHM9 967 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 ZNF697Q5TEC3 545 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 RASIP1Q5U651 963 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 GDF6Q6KF10 455 aaPredicted RBP12.35□□□□□ -0.43
LINC01238-202ENST00000426962 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 METTL7BQ6UX53 244 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 RUFY3Q7L099 469 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 CYFIP1Q7L576 1253 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 GIMAP8Q8ND71 665 aaPredicted RBP12.35□□□□□ -0.43
LINC01238-202ENST00000426962 HERVK_113Q902F9 699 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 GPRASP2Q96D09 838 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 SCLYQ96I15 445 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 CDHR1Q96JP9 859 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 ALG1Q9BT22 464 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 GLT8D2Q9H1C3 349 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 BCAS3Q9H6U6 928 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 EHMT1Q9H9B1 1298 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 BARHL2Q9NY43 387 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 HDAC6Q9UBN7 1215 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 GTF2IRD1Q9UHL9 959 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 SCN10AQ9Y5Y9 1956 aa12.35□□□□□ -0.43
LINC01238-202ENST00000426962 LAMA2P24043 3122 aaKnown RBP12.35□□□□□ -0.43
LINC01238-202ENST00000426962 STXBP3O00186 592 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 NOP56O00567 594 aaKnown RBP12.34□□□□□ -0.43
LINC01238-202ENST00000426962 PRPF3O43395 683 aaKnown RBP12.34□□□□□ -0.43
LINC01238-202ENST00000426962 FOSP01100 380 aaPredicted RBP12.34□□□□□ -0.43
LINC01238-202ENST00000426962 PFKMP08237 780 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 IQCF3P0C7M6 154 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 ZNF286BP0CG31 522 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 EVCP57679 992 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
LINC01238-202ENST00000426962 TYW1BQ6NUM6 668 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 CAGE1Q8TC20 777 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 C16orf70Q9BSU1 422 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 TM6SF1Q9BZW5 370 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 MTIF3Q9H2K0 278 aaKnown RBP12.34□□□□□ -0.43
LINC01238-202ENST00000426962 SEMA6BQ9H3T3 888 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 UBIAD1Q9Y5Z9 338 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 CYP46A1Q9Y6A2 500 aa12.34□□□□□ -0.43
LINC01238-202ENST00000426962 H3BRB1 525 aa12.33□□□□□ -0.44
LINC01238-202ENST00000426962 ITGB5P18084 799 aa12.33□□□□□ -0.44
LINC01238-202ENST00000426962 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
LINC01238-202ENST00000426962 RFC2P35250 354 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms