RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 PSMD2Q13200 908 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 NONOQ15233 471 aaKnown RBP eCLIP17.61■□□□□ 0.411e-6■■■■□ 24.7
PKP4-205ENST00000426248 CCDC122Q5T0U0 273 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 GPATCH4Q5T3I0 446 aaKnown RBP17.61■□□□□ 0.41
PKP4-205ENST00000426248 CCDC43Q96MW1 224 aaKnown RBP17.61■□□□□ 0.41
PKP4-205ENST00000426248 GOPCQ9HD26 462 aa17.61■□□□□ 0.41
PKP4-205ENST00000426248 FAM205CA6NFA0 338 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 POLR2DO15514 142 aaKnown RBP17.6■□□□□ 0.41
PKP4-205ENST00000426248 CASP14P31944 242 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 IQCEQ6IPM2 695 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.6■□□□□ 0.412e-7■■■■□ 22.7
PKP4-205ENST00000426248 IFT81Q8WYA0 676 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 DCPSQ96C86 337 aaKnown RBP17.6■□□□□ 0.41
PKP4-205ENST00000426248 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.6■□□□□ 0.41
PKP4-205ENST00000426248 RTEL1Q9NZ71 1219 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 RAB21Q9UL25 225 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 CICQ96RK0 1608 aaPredicted RBP17.6■□□□□ 0.41
PKP4-205ENST00000426248 RAD9BQ6WBX8 426 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 DTHD1Q6ZMT9 781 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 FOXP1Q9H334 677 aaPredicted RBP17.6■□□□□ 0.41
PKP4-205ENST00000426248 FAM217BQ9NTX9 383 aaPredicted RBP17.6■□□□□ 0.41
PKP4-205ENST00000426248 KCNH3Q9ULD8 1083 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 MACROD2A1Z1Q3 448 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 TXKP42681 527 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 GRM4Q14833 912 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 AGBL3Q8NEM8 1001 aa17.6■□□□□ 0.41
PKP4-205ENST00000426248 WNK3Q9BYP7 1800 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 USP17L10C9JJH3 530 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 BMP3P12645 472 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 CCNHP51946 323 aaPredicted RBP17.59■□□□□ 0.41
PKP4-205ENST00000426248 TUBB2AQ13885 445 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 TMEM266Q2M3C6 531 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 ANGEL2Q5VTE6 544 aaKnown RBP17.59■□□□□ 0.41
PKP4-205ENST00000426248 TUBB2BQ9BVA1 445 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 ZNF341Q9BYN7 854 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 PSTPIP2Q9H939 334 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 SAR1BQ9Y6B6 198 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 ANKRD36CQ5JPF3 1778 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 CAND2O75155 1236 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 BMP15O95972 392 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 GUCY1A3Q02108 690 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 CKAP4Q07065 602 aaKnown RBP17.59■□□□□ 0.41
PKP4-205ENST00000426248 PTGDRQ13258 359 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 NTRK3Q16288 839 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 KIF3CO14782 793 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 ENTPD3O75355 529 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 DCAF15Q66K64 600 aa17.59■□□□□ 0.41
PKP4-205ENST00000426248 C2orf54Q08AI8 447 aa17.58■□□□□ 0.41
PKP4-205ENST00000426248 FAM151AQ8WW52 585 aa17.58■□□□□ 0.41
PKP4-205ENST00000426248 BPIFA3Q9BQP9 254 aa17.58■□□□□ 0.41
PKP4-205ENST00000426248 FAM198AQ9UFP1 575 aa17.58■□□□□ 0.41
PKP4-205ENST00000426248 BRWD3Q6RI45 1802 aa17.58■□□□□ 0.41
PKP4-205ENST00000426248 N4BP2Q86UW6 1770 aaPredicted RBP17.58■□□□□ 0.41
PKP4-205ENST00000426248 WNT10BO00744 389 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 CDC25AP30304 524 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 CDC25CP30307 473 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 SLC39A14Q15043 492 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.4
PKP4-205ENST00000426248 SEC24CP53992 1094 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 SLC7A5Q01650 507 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 MYO1EQ12965 1108 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 CRYMQ14894 314 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 CFAP58Q5T655 872 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 ARMC3Q5W041 872 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 SAAL1Q96ER3 474 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 SH3GL3Q99963 347 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 SPEF2Q9C093 1822 aa17.58■□□□□ 0.4
PKP4-205ENST00000426248 A0A1W2PQ27 194 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 A0A1W2PQ64 194 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 A0A1W2PQD8 194 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 PPP1R7Q15435 360 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 UBE2SQ16763 222 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 PARP9Q8IXQ6 854 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 SLC40A1Q9NP59 571 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 PKD2L1Q9P0L9 805 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 STK36Q9NRP7 1315 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 RCSD1Q6JBY9 416 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 WRNIP1Q96S55 665 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 DEFB129Q9H1M3 183 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 VPS16Q9H269 839 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 POLR3EQ9NVU0 708 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 HAUS2Q9NVX0 235 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 BACH1O14867 736 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 TEX33O43247 280 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 FLOT1O75955 427 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 DDNO94850 711 aaPredicted RBP17.57■□□□□ 0.4
PKP4-205ENST00000426248 CLTAP09496 248 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 IDEP14735 1019 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 SHMT1P34896 483 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 GRM1Q13255 1194 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 SHROOM1Q2M3G4 852 aaPredicted RBP17.57■□□□□ 0.4
PKP4-205ENST00000426248 FBXO11Q86XK2 927 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 RAB34Q9BZG1 259 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 GOLGA8KD6RF30 607 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 ASNSP08243 561 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 RCAN1P53805 252 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 KRT25Q7Z3Z0 450 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 PIK3R5Q8WYR1 880 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 GGA3Q9NZ52 723 aa17.57■□□□□ 0.4
PKP4-205ENST00000426248 PCDHA4Q9UN74 947 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms