RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 ADORA2AP29274 412 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 HOXA13P31271 388 aaPredicted RBP6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 MCM2P49736 904 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 GRB14Q14449 540 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 KIF22Q14807 665 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 NPY5RQ15761 445 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 CCL14Q16627 93 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 UBE2SQ16763 222 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 USP17L6PQ6QN14 398 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 OTOP1Q7RTM1 612 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 CCAR1Q8IX12 1150 aaKnown RBP6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 NPAS3Q8IXF0 933 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 ANKRD35Q8N283 1001 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 SYTL5Q8TDW5 730 aaPredicted RBP6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 CWC22Q9HCG8 908 aaKnown RBP6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 TMEM260Q9NX78 707 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 BARHL2Q9NY43 387 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 FLRT1Q9NZU1 646 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 SRRDQ9UH36 339 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 KCNJ14Q9UNX9 436 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 MRPL11Q9Y3B7 192 aaKnown RBP6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 TRIM17Q9Y577 477 aa6.58□□□□□ -1.36
HERPUD2-204ENST00000426180 SMCO2A6NFE2 343 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 MEIS2O14770 477 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 STRNO43815 780 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 CDKL5O76039 1030 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 CFBP00751 764 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 CCNYL3P0C7X3 344 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 FCER1AP12319 257 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 ELNP15502 786 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 CALML3P27482 149 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 GJB2P29033 226 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 COPB2P35606 906 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 FLT3LGP49771 235 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 HSD17B4P51659 736 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 ADCY7P51828 1080 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 NAPAP54920 295 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 RPS6P62753 249 aaKnown RBP6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 SH3BP2P78314 561 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 AKAP17AQ02040 695 aaKnown RBP6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 KCTD2Q14681 263 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 ZNF792Q3KQV3 632 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 CPLX2Q6PUV4 134 aaKnown RBP6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 RNF207Q6ZRF8 634 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 TRIM46Q7Z4K8 759 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 HSCBQ8IWL3 235 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 TRIM22Q8IYM9 498 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 FAM133AQ8N9E0 248 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 RGS22Q8NE09 1264 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 IL27Q8NEV9 243 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 RASGRP4Q8TDF6 673 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 IRF7Q92985 503 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 PGBD1Q96JS3 809 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 TAAR1Q96RJ0 339 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 LLPHQ9BRT6 129 aaKnown RBP6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 ALG1Q9BT22 464 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 PSTPIP2Q9H939 334 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 FBXO40Q9UH90 709 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 PCDHGC3Q9UN70 934 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 PTCH2Q9Y6C5 1203 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 IVNS1ABPQ9Y6Y0 642 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 PLXNB2O15031 1838 aa6.57□□□□□ -1.36
HERPUD2-204ENST00000426180 GCOM1H8Y6P7 765 aaPredicted RBP6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 hCG_1984214I3L0E3 225 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 IGHA2P01877 340 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 HOXC6P09630 235 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 POLR2MP0CAP2 368 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 RGS2P41220 211 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 UBXN2AP68543 259 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 GUCY1B3Q02153 619 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 GHRHRQ02643 423 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 JAKMIP3Q5VZ66 844 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 KRT40Q6A162 431 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 CTU1Q7Z7A3 348 aaKnown RBP6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 DPP9Q86TI2 863 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 FCHSD1Q86WN1 690 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 MCF2L2Q86YR7 1114 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 ABRAQ8N0Z2 381 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 ZNF713Q8N859 430 aaPredicted RBP6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 IL31RAQ8NI17 732 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 TRIB2Q92519 343 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 APBA2Q99767 749 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 PHF20Q9BVI0 1012 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 ZMYND12Q9H0C1 365 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 RIC8AQ9NPQ8 531 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 PRDM10Q9NQV6 1147 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 SH3GLB2Q9NR46 395 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 EVA1BQ9NVM1 165 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 BIN2Q9UBW5 565 aaPredicted RBP6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 PNMA2Q9UL42 364 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 PTPN22Q9Y2R2 807 aa6.56□□□□□ -1.36
HERPUD2-204ENST00000426180 SMCHD1A6NHR9 2005 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 BAZ2BQ9UIF8 2168 aaKnown RBP6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 PFASO15067 1338 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 ESYT2A0FGR8 921 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 KIF28PB7ZC32 967 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 M0R2N6 131 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 PIK3CDO00329 1044 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 EDIL3O43854 480 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms