RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
UBR4-207ENST00000425413 CRACR2AQ9BSW2 395 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 BCAS3Q9H6U6 928 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 HDAC6Q9UBN7 1215 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 DUSP10Q9Y6W6 482 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 A0A1W2PQC6 194 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 FAM86B1E9PN63 330 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 CFBP00751 764 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 FAM86B2P0C5J1 330 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 H2AFXP16104 143 aaPredicted RBP12.86□□□□□ -0.35
UBR4-207ENST00000425413 ZNF76P36508 570 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 APBA1Q02410 837 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 ORC2Q13416 577 aaPredicted RBP12.86□□□□□ -0.35
UBR4-207ENST00000425413 SLC15A2Q16348 729 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 FAM26FQ5R3K3 315 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 CCDC122Q5T0U0 273 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 LARGE2Q8N3Y3 721 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 MKL1Q969V6 931 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 NDST4Q9H3R1 872 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 ZNHIT6Q9NWK9 470 aaKnown RBP12.86□□□□□ -0.35
UBR4-207ENST00000425413 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 CHMP2AO43633 222 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 ENOX2Q16206 610 aaKnown RBP12.85□□□□□ -0.35
UBR4-207ENST00000425413 FAM83BQ5T0W9 1011 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 C7orf43Q8WVR3 580 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 DNAJC19Q96DA6 116 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 DNAJC7Q99615 494 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
UBR4-207ENST00000425413 TMOD2Q9NZR1 351 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 MACROD2A1Z1Q3 448 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 PSMD14O00487 310 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 HERVK_113P62684 666 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 MYOCDQ8IZQ8 938 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 TMEM39BQ9GZU3 492 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 LACRTQ9GZZ8 138 aa12.85□□□□□ -0.35
UBR4-207ENST00000425413 RHOXF2BP0C7M4 288 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 GCFC2P16383 781 aaKnown RBP12.84□□□□□ -0.35
UBR4-207ENST00000425413 FECHP22830 423 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 CHMP4BP1P59074 171 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 CCDC40Q4G0X9 1142 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 VWA3BQ502W6 1294 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 GUF1Q8N442 669 aaKnown RBP12.84□□□□□ -0.35
UBR4-207ENST00000425413 RHOXF2Q9BQY4 288 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 NHEJ1Q9H9Q4 299 aaPredicted RBP12.84□□□□□ -0.35
UBR4-207ENST00000425413 NLRC4Q9NPP4 1024 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 MYH4Q9Y623 1939 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 SRGAP2O75044 1071 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 HDLBPQ00341 1268 aaKnown RBP12.84□□□□□ -0.35
UBR4-207ENST00000425413 DLGAP5Q15398 846 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 TMCO3Q6UWJ1 677 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 KRT222Q8N1A0 295 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 DRC1Q96MC2 740 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 NAPGQ99747 312 aaPredicted RBP12.84□□□□□ -0.35
UBR4-207ENST00000425413 STK32BQ9NY57 414 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 RRAGAQ7L523 313 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 CATSPER3Q86XQ3 398 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 CAPZA3Q96KX2 299 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 TSG101Q99816 390 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 PARD6BQ9BYG5 372 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 GLIS2Q9BZE0 524 aaPredicted RBP12.84□□□□□ -0.35
UBR4-207ENST00000425413 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
UBR4-207ENST00000425413 TTYH3Q9C0H2 523 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 KCNMB3Q9NPA1 279 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 FBXO28Q9NVF7 368 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 CDC23Q9UJX2 597 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 NRXN2Q9P2S2 1712 aa12.84□□□□□ -0.35
UBR4-207ENST00000425413 FOCADQ5VW36 1801 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 SFI1A8K8P3 1242 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 OPLAHO14841 1288 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 IPO7O95373 1038 aaKnown RBP12.83□□□□□ -0.36
UBR4-207ENST00000425413 ZBED6P86452 979 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 LRRC55Q6ZSA7 311 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 GOLGA1Q92805 767 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 MYH7BA7E2Y1 1941 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 CYP11B2P19099 503 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 USP11P51784 963 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 ARID5AQ03989 594 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 OGFOD1Q8N543 542 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 ANKRD13CQ8N6S4 541 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 JAKMIP2Q96AA8 810 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 ARGLU1Q9NWB6 273 aaPredicted RBP12.83□□□□□ -0.36
UBR4-207ENST00000425413 PKD2L1Q9P0L9 805 aa12.83□□□□□ -0.36
UBR4-207ENST00000425413 SHTN1A0MZ66 631 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
UBR4-207ENST00000425413 CASP5P51878 434 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 TRMT1LQ7Z2T5 733 aaKnown RBP12.82□□□□□ -0.36
UBR4-207ENST00000425413 PIGOQ8TEQ8 1089 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 CCDC42Q96M95 316 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 MRIQ9BWK5 157 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 NT5C3AQ9H0P0 336 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 ZNF70Q9UC06 446 aaPredicted RBP12.82□□□□□ -0.36
UBR4-207ENST00000425413 RSPH10B2B2RC85 870 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 ZBTB39O15060 712 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 RSPH10BP0C881 870 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms