RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 USP26Q9BXU7 913 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 EPHX3Q9H6B9 360 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 UBE2ZQ9H832 354 aaPredicted RBP14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 JMJD4Q9H9V9 463 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 MCM3APO60318 1980 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 UNC80Q8N2C7 3258 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 LINC01553A4QN01 128 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 EPOPA6NHQ4 379 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 H3BRB1 525 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 NBNO60934 754 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 GGPS1O95749 300 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 DEFB103AP81534 67 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 LEXMQ3ZCV2 418 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 TIGD5Q53EQ6 642 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 MYSM1Q5VVJ2 828 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 B4GALNT3Q6L9W6 998 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 VSIG10LQ86VR7 867 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 GJD3Q8N144 294 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 DBF4BQ8NFT6 615 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 GDPD5Q8WTR4 605 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 APBB2Q92870 758 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 TNPO1Q92973 898 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 CUL5Q93034 780 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 PDCD2LQ9BRP1 358 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 UPF3BQ9BZI7 483 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 CPVLQ9H3G5 476 aa14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 TUT1Q9H6E5 874 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ZNF215Q9UL58 517 aaPredicted RBP14.22□□□□□ -0.13
HLA-DQB3-203ENST00000425319 PI4K2BG5E9Z4 385 aa14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 HAS3O00219 553 aa14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ZNF286BP0CG31 522 aa14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 KCNA5P22460 613 aa14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 HSD17B4P51659 736 aa14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 STOX1Q6ZVD7 989 aa14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 RSPH3Q86UC2 560 aa14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 FCHSD1Q86WN1 690 aa14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ENAHQ8N8S7 591 aaPredicted RBP14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 GIMAP8Q8ND71 665 aaPredicted RBP14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 RUFY2Q8WXA3 655 aa14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 MRPL38Q96DV4 380 aaKnown RBP14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 RAPGEFL1Q9UHV5 662 aa14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 RWDD3Q9Y3V2 267 aa14.21□□□□□ -0.13
HLA-DQB3-203ENST00000425319 NEDD4P46934 1319 aa14.2□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.2□□□□□ -0.14
HLA-DQB3-203ENST00000425319 LCHNA4D1U4 455 aa14.2□□□□□ -0.14
HLA-DQB3-203ENST00000425319 GPM6BQ13491 265 aa14.2□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PGM5Q15124 567 aa14.2□□□□□ -0.14
HLA-DQB3-203ENST00000425319 CHD1LQ86WJ1 897 aa14.2□□□□□ -0.14
HLA-DQB3-203ENST00000425319 HOMER1Q86YM7 354 aa14.2□□□□□ -0.14
HLA-DQB3-203ENST00000425319 DHX38Q92620 1227 aaKnown RBP14.2□□□□□ -0.14
HLA-DQB3-203ENST00000425319 COL20A1Q9P218 1284 aa14.2□□□□□ -0.14
HLA-DQB3-203ENST00000425319 U3KPZ7 1027 aaPredicted RBP14.2□□□□□ -0.14
HLA-DQB3-203ENST00000425319 LPXNO60711 386 aa14.19□□□□□ -0.14
HLA-DQB3-203ENST00000425319 UPP2O95045 317 aa14.19□□□□□ -0.14
HLA-DQB3-203ENST00000425319 HSDL1Q3SXM5 330 aa14.19□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PTCRAQ6ISU1 281 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQB3-203ENST00000425319 TMCO2Q7Z6W1 182 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQB3-203ENST00000425319 RALYLQ86SE5 291 aaKnown RBP14.19□□□□□ -0.14
HLA-DQB3-203ENST00000425319 NLRX1Q86UT6 975 aa14.19□□□□□ -0.14
HLA-DQB3-203ENST00000425319 SERINC5Q86VE9 423 aa14.19□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PPP2R3CQ969Q6 453 aa14.19□□□□□ -0.14
HLA-DQB3-203ENST00000425319 UIMC1Q96RL1 719 aa14.19□□□□□ -0.14
HLA-DQB3-203ENST00000425319 OSBPL3Q9H4L5 887 aa14.19□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PNMA6FA0A0J9YX94 578 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PRR33A8MZF0 331 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 IFIT3O14879 490 aaKnown RBP14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 SORBS3O60504 671 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 RPLP2P05387 115 aaKnown RBP14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 RB1P06400 928 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 GPNMBQ14956 572 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 EPC2Q52LR7 807 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PLEKHG4Q58EX7 1191 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 XRRA1Q6P2D8 792 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 CATIPQ7Z7H3 387 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 FAM178BQ8IXR5 827 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 FIBCD1Q8N539 461 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 BANK1Q8NDB2 785 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 SMARCC2Q8TAQ2 1214 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 TOP1MTQ969P6 601 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 IL17RAQ96F46 866 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 LRRC37A2A6NM11 1700 aa14.18□□□□□ -0.14
HLA-DQB3-203ENST00000425319 LAMA2P24043 3122 aaKnown RBP14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 H3BNC9 293 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 FIBPO43427 364 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 ARHGEF15O94989 841 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 SMIM10L2AP0DMW4 78 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 SMIM10L2BP0DMW5 78 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 HOXD8P13378 290 aaPredicted RBP14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 HOXA13P31271 388 aaPredicted RBP14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 HTRA4P83105 476 aaPredicted RBP14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 ZNF200P98182 395 aaPredicted RBP14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 GHRHRQ02643 423 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 WTAPQ15007 396 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 TRIM71Q2Q1W2 868 aaKnown RBP14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 TMEM192Q8IY95 271 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 CDHR1Q96JP9 859 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 CTAGE1Q96RT6 745 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 C17orf80Q9BSJ5 609 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 C16orf70Q9BSU1 422 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms