RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 ALDH8A1Q9H2A2 487 aaPredicted RBP20.56■□□□□ 0.88
IGHV3-47-201ENST00000425060 BCAS3Q9H6U6 928 aa20.56■□□□□ 0.88
IGHV3-47-201ENST00000425060 PDRG1Q9NUG6 133 aa20.56■□□□□ 0.88
IGHV3-47-201ENST00000425060 SMCO2A6NFE2 343 aa20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 TLR3O15455 904 aaKnown RBP20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 B4GALT4O60513 344 aa20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 GGPS1O95749 300 aa20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 SCG2P13521 617 aa20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 CCT2P78371 535 aaKnown RBP20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 NBPF20Q3BBV1 942 aa20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 GNPTABQ3T906 1256 aa20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 PHKBQ93100 1093 aa20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 LARP6Q9BRS8 491 aaKnown RBP20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 TRPV6Q9H1D0 765 aa20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 NCOA5Q9HCD5 579 aaKnown RBP20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 MYH7BA7E2Y1 1941 aa20.55■□□□□ 0.88
IGHV3-47-201ENST00000425060 SPDYE3A6NKU9 549 aa20.54■□□□□ 0.88
IGHV3-47-201ENST00000425060 FIBPO43427 364 aa20.54■□□□□ 0.88
IGHV3-47-201ENST00000425060 EIF5BO60841 1220 aaKnown RBP20.54■□□□□ 0.88
IGHV3-47-201ENST00000425060 CLK2P49760 499 aaKnown RBP20.54■□□□□ 0.88
IGHV3-47-201ENST00000425060 DGKDQ16760 1214 aa20.54■□□□□ 0.88
IGHV3-47-201ENST00000425060 HSDL1Q3SXM5 330 aa20.54■□□□□ 0.88
IGHV3-47-201ENST00000425060 NFRKBQ6P4R8 1299 aa20.54■□□□□ 0.88
IGHV3-47-201ENST00000425060 RNF26Q9BY78 433 aaPredicted RBP20.54■□□□□ 0.88
IGHV3-47-201ENST00000425060 UBIAD1Q9Y5Z9 338 aa20.54■□□□□ 0.88
IGHV3-47-201ENST00000425060 ESYT2A0FGR8 921 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 SOX1O00570 391 aaPredicted RBP20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 PPFIA4O75335 1185 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 SLC34A2O95436 690 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 ITGB5P18084 799 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 ADCY7P51828 1080 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 EPHB4P54760 987 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 LRIT3Q3SXY7 679 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 MFSD5Q6N075 450 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 SPATA33Q96N06 139 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 SENP7Q9BQF6 1050 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 ZMYND12Q9H0C1 365 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 GLT8D2Q9H1C3 349 aa20.53■□□□□ 0.88
IGHV3-47-201ENST00000425060 ADAMTS3O15072 1205 aa20.52■□□□□ 0.88
IGHV3-47-201ENST00000425060 FOSP01100 380 aaPredicted RBP20.52■□□□□ 0.88
IGHV3-47-201ENST00000425060 PTPN11Q06124 597 aaPredicted RBP20.52■□□□□ 0.88
IGHV3-47-201ENST00000425060 NEDD9Q14511 834 aa20.52■□□□□ 0.88
IGHV3-47-201ENST00000425060 PPP1R13LQ8WUF5 828 aa20.52■□□□□ 0.88
IGHV3-47-201ENST00000425060 GPRASP2Q96D09 838 aa20.52■□□□□ 0.88
IGHV3-47-201ENST00000425060 TRMT13Q9NUP7 481 aaKnown RBP20.52■□□□□ 0.88
IGHV3-47-201ENST00000425060 HAS3O00219 553 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 SORBS3O60504 671 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 PPFIA3O75145 1194 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 SHHQ15465 462 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 C9orf50Q5SZB4 431 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 NLRX1Q86UT6 975 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 SESTD1Q86VW0 696 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 PGBD1Q96JS3 809 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 NOC4LQ9BVI4 516 aaKnown RBP20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 SLC26A6Q9BXS9 759 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 ANO3Q9BYT9 981 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 MLXIPQ9HAP2 919 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 TMEM260Q9NX78 707 aa20.51■□□□□ 0.87
IGHV3-47-201ENST00000425060 LAMA3Q16787 3333 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 ATP9AO75110 1047 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 F2P00734 622 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 FPGSQ05932 587 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 AP3B2Q13367 1082 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 C8orf34Q49A92 452 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 METTL7BQ6UX53 244 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 CYFIP1Q7L576 1253 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 C16orf70Q9BSU1 422 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 PPP1R12CQ9BZL4 782 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 JADE2Q9NQC1 790 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 TPCN1Q9ULQ1 816 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 UMODL1Q5DID0 1318 aa20.5■□□□□ 0.87
IGHV3-47-201ENST00000425060 MAFGO15525 162 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 SUPT20HL2P0C7V6 817 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 KCNA2P16389 499 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 CYP2C18P33260 490 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 SREBF1P36956 1147 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 PSEN2P49810 448 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 AKAP17AQ02040 695 aaKnown RBP20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 C16orf59Q7L2K0 433 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 CCDC12Q8WUD4 166 aaPredicted RBP20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 CRYGNQ8WXF5 182 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 CTAGE1Q96RT6 745 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 MXRA8Q9BRK3 442 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 HIPK3Q9H422 1215 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 EHMT1Q9H9B1 1298 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 TELO2Q9Y4R8 837 aa20.49■□□□□ 0.87
IGHV3-47-201ENST00000425060 ZNF286BP0CG31 522 aa20.48■□□□□ 0.87
IGHV3-47-201ENST00000425060 CYP2C9P11712 490 aa20.48■□□□□ 0.87
IGHV3-47-201ENST00000425060 AK2P54819 239 aa20.48■□□□□ 0.87
IGHV3-47-201ENST00000425060 STK3Q13188 491 aa20.48■□□□□ 0.87
IGHV3-47-201ENST00000425060 FAM47CQ5HY64 1035 aa20.48■□□□□ 0.87
IGHV3-47-201ENST00000425060 CYP2W1Q8TAV3 490 aa20.48■□□□□ 0.87
IGHV3-47-201ENST00000425060 LRCH3Q96II8 777 aa20.48■□□□□ 0.87
IGHV3-47-201ENST00000425060 CDHR1Q96JP9 859 aa20.48■□□□□ 0.87
IGHV3-47-201ENST00000425060 GPR20Q99678 358 aa20.48■□□□□ 0.87
IGHV3-47-201ENST00000425060 C6orf50Q9HD87 102 aa20.48■□□□□ 0.87
IGHV3-47-201ENST00000425060 PFKFB2O60825 505 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 CSF2RAP15509 400 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 SSRP1Q08945 709 aaKnown RBP20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 SCRN1Q12765 414 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms