RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 MTMR8Q96EF0 704 aa8.11□□□□□ -1.11
EPHA4-206ENST00000424339 ZNF837Q96EG3 531 aaPredicted RBP8.11□□□□□ -1.11
EPHA4-206ENST00000424339 INTS4Q96HW7 963 aaKnown RBP8.11□□□□□ -1.11
EPHA4-206ENST00000424339 TRERF1Q96PN7 1200 aa8.11□□□□□ -1.11
EPHA4-206ENST00000424339 NUP88Q99567 741 aaPredicted RBP8.11□□□□□ -1.11
EPHA4-206ENST00000424339 PTPN18Q99952 460 aa8.11□□□□□ -1.11
EPHA4-206ENST00000424339 MYL10Q9BUA6 226 aa8.11□□□□□ -1.11
EPHA4-206ENST00000424339 RANBP17Q9H2T7 1088 aaKnown RBP8.11□□□□□ -1.11
EPHA4-206ENST00000424339 SLC38A10Q9HBR0 1119 aa8.11□□□□□ -1.11
EPHA4-206ENST00000424339 TMPRSS4Q9NRS4 437 aa8.11□□□□□ -1.11
EPHA4-206ENST00000424339 MORF4L1Q9UBU8 362 aa8.11□□□□□ -1.11
EPHA4-206ENST00000424339 PRR12Q9ULL5 1215 aa8.11□□□□□ -1.11
EPHA4-206ENST00000424339 MTMR7Q9Y216 660 aa8.11□□□□□ -1.11
EPHA4-206ENST00000424339 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.11□□□□□ -1.11
EPHA4-206ENST00000424339 MYH6P13533 1939 aa8.11□□□□□ -1.11
EPHA4-206ENST00000424339 FRMPD2Q68DX3 1309 aaPredicted RBP8.1□□□□□ -1.11
EPHA4-206ENST00000424339 KRTAP9-6A0A140TA67 174 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 PRPF3O43395 683 aaKnown RBP8.1□□□□□ -1.11
EPHA4-206ENST00000424339 LILRB3O75022 631 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 AOC2O75106 756 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 SLC25A27O95847 323 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 ICAM1P05362 532 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 ADH1AP07327 375 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 GOLGA8HP0CJ92 632 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 XBP1P17861 261 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 SSRP1Q08945 709 aaKnown RBP8.1□□□□□ -1.11
EPHA4-206ENST00000424339 SCRN1Q12765 414 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 ARHGEF6Q15052 776 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 DBN1Q16643 649 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 ADGRF4Q8IZF3 695 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 STAG2Q8N3U4 1231 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 SHCBP1Q8NEM2 672 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 GPRC5AQ8NFJ5 357 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 TMX3Q96JJ7 454 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 AMNQ9BXJ7 453 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 TEX13BQ9BXU2 312 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 GLT8D2Q9H1C3 349 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 FBXO28Q9NVF7 368 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 FBXO40Q9UH90 709 aa8.1□□□□□ -1.11
EPHA4-206ENST00000424339 ADGRA2Q96PE1 1338 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 DEXIO95424 95 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 RXRAP19793 462 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 CDC27P30260 824 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 MAPK4P31152 587 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 ADD1P35611 737 aaKnown RBP8.09□□□□□ -1.11
EPHA4-206ENST00000424339 SLC16A2P36021 539 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 RAB15P59190 212 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 CCT2P78371 535 aaKnown RBP8.09□□□□□ -1.11
EPHA4-206ENST00000424339 STK3Q13188 491 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 CUL4AQ13619 759 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 NTRK3Q16288 839 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 CDC37Q16543 378 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-206ENST00000424339 MCTP2Q6DN12 878 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 RIOX2Q8IUF8 465 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 CCAR1Q8IX12 1150 aaKnown RBP8.09□□□□□ -1.11
EPHA4-206ENST00000424339 CCDC144CPQ8IYA2 1237 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 SRBD1Q8N5C6 995 aaKnown RBP8.09□□□□□ -1.11
EPHA4-206ENST00000424339 DNAJC5GQ8N7S2 189 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 JMYQ8N9B5 988 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 CHST13Q8NET6 341 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 CCDC148Q8NFR7 591 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 GTPBP3Q969Y2 492 aaKnown RBP8.09□□□□□ -1.11
EPHA4-206ENST00000424339 ATG4CQ96DT6 458 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 P2RX7Q99572 595 aaKnown RBP8.09□□□□□ -1.11
EPHA4-206ENST00000424339 MROH8Q9H579 483 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 JMJD4Q9H9V9 463 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 SH3GLB2Q9NR46 395 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 MAP3K20Q9NYL2 800 aaKnown RBP8.09□□□□□ -1.11
EPHA4-206ENST00000424339 LIMD1Q9UGP4 676 aa8.09□□□□□ -1.11
EPHA4-206ENST00000424339 ZNF214Q9UL59 606 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-206ENST00000424339 COL11A1P12107 1806 aaPredicted RBP8.08□□□□□ -1.12
EPHA4-206ENST00000424339 ABCB11O95342 1321 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 ESYT2A0FGR8 921 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 TRIM66O15016 1216 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 OIP5O43482 229 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 CYTH3O43739 400 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 STRNO43815 780 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 PLEKHA8P1O95397 391 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 GNRH1P01148 92 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 HSP90AA1P07900 732 aaKnown RBP8.08□□□□□ -1.12
EPHA4-206ENST00000424339 CYP2C8P10632 490 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 SCG2P13521 617 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 MX2P20592 715 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 PDCP20941 246 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 STAT3P40763 770 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 ERVK-9P63128 1117 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 ERVK-24P63145 666 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 HTRA3P83110 453 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 PDE4DQ08499 809 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 CRHR2Q13324 411 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 DGKZQ13574 1117 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 KIF22Q14807 665 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 PFKFB3Q16875 520 aaPredicted RBP8.08□□□□□ -1.12
EPHA4-206ENST00000424339 QRICH1Q2TAL8 776 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 TTBK2Q6IQ55 1244 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 GALNT17Q6IS24 598 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 C17orf99Q6UX52 265 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 NOL8Q76FK4 1167 aaKnown RBP8.08□□□□□ -1.12
EPHA4-206ENST00000424339 NBPF11Q86T75 865 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 ALYREFQ86V81 257 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms