RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 KIAA1024Q9UPX6 916 aa13.05□□□□□ -0.32
ERCC1-204ENST00000423698 TIAM2Q8IVF5 1701 aa13.05□□□□□ -0.32
ERCC1-204ENST00000423698 H0YHG0 523 aa13.05□□□□□ -0.32
ERCC1-204ENST00000423698 TRAF5O00463 557 aa13.05□□□□□ -0.32
ERCC1-204ENST00000423698 PCP11498 1178 aaKnown RBP13.05□□□□□ -0.32
ERCC1-204ENST00000423698 KCNA4P22459 653 aa13.05□□□□□ -0.32
ERCC1-204ENST00000423698 GNA11P29992 359 aa13.05□□□□□ -0.32
ERCC1-204ENST00000423698 SPAG1Q07617 926 aa13.05□□□□□ -0.32
ERCC1-204ENST00000423698 C16orf86Q6ZW13 317 aa13.05□□□□□ -0.32
ERCC1-204ENST00000423698 ZMYND12Q9H0C1 365 aa13.05□□□□□ -0.32
ERCC1-204ENST00000423698 POTEB3A0JP26 581 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 POTECB2RU33 542 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 AKR1B10O60218 316 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 GFPT1Q06210 699 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-204ENST00000423698 POTEBQ6S5H4 581 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 NEDD1Q8NHV4 660 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 PDE2AO00408 941 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-204ENST00000423698 ZNF263O14978 683 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 PPFIA4O75335 1185 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 KCNV1Q6PIU1 500 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 KRT25Q7Z3Z0 450 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 ELOA2Q8IYF1 753 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-204ENST00000423698 HDAC7Q8WUI4 952 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 PNMA5Q96PV4 448 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 CD248Q9HCU0 757 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 BLOC1S4Q9NUP1 217 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 MTMR4Q9NYA4 1195 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 PKD2L1Q9P0L9 805 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 FAM169AQ9Y6X4 670 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 A0A1B0GUL6 1792 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 CHMP2AO43633 222 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 RHOBTB3O94955 611 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 EIF4A3P38919 411 aaKnown RBP13.04□□□□□ -0.32
ERCC1-204ENST00000423698 RASSF7Q02833 373 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 CACNA2D4Q7Z3S7 1137 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 EFCAB13Q8IY85 973 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 LARP4BQ92615 738 aaKnown RBP13.04□□□□□ -0.32
ERCC1-204ENST00000423698 CCDC47Q96A33 483 aaKnown RBP13.04□□□□□ -0.32
ERCC1-204ENST00000423698 JMJD4Q9H9V9 463 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-204ENST00000423698 CAPN6Q9Y6Q1 641 aa13.04□□□□□ -0.32
ERCC1-204ENST00000423698 GPR75-ASB3A0A0A6YYF3 556 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 PPP2R5AQ15172 486 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 CCDC40Q4G0X9 1142 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 NFRKBQ6P4R8 1299 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 CCDC84Q86UT8 332 aaPredicted RBP13.03□□□□□ -0.32
ERCC1-204ENST00000423698 COG1Q8WTW3 980 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 MS4A14Q96JA4 679 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 NAA15Q9BXJ9 866 aaKnown RBP13.03□□□□□ -0.32
ERCC1-204ENST00000423698 SLC24A3Q9HC58 644 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 DDX25Q9UHL0 483 aaKnown RBP13.03□□□□□ -0.32
ERCC1-204ENST00000423698 CAPN7Q9Y6W3 813 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 LRRC53A6NM62 1247 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 POTEIP0CG38 1075 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 MYBL2P10244 700 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 CCNE1P24864 410 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 GGCXP38435 758 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 PLS1Q14651 629 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 MIIPQ5JXC2 388 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 KRT79Q5XKE5 535 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 POTEGQ6S5H5 508 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 POTEEQ6S8J3 1075 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 CYP2W1Q8TAV3 490 aa13.03□□□□□ -0.32
ERCC1-204ENST00000423698 RBM17Q96I25 401 aaKnown RBP13.03□□□□□ -0.32
ERCC1-204ENST00000423698 QTRT2Q9H974 415 aaKnown RBP13.03□□□□□ -0.32
ERCC1-204ENST00000423698 A0A087WUV0 522 aaPredicted RBP13.02□□□□□ -0.32
ERCC1-204ENST00000423698 EDIL3O43854 480 aa13.02□□□□□ -0.32
ERCC1-204ENST00000423698 SYF2O95926 243 aaKnown RBP13.02□□□□□ -0.32
ERCC1-204ENST00000423698 TUBB4AP04350 444 aa13.02□□□□□ -0.32
ERCC1-204ENST00000423698 PABPC4Q13310 644 aaKnown RBP eCLIP13.02□□□□□ -0.321e-6■■■■□ 26
ERCC1-204ENST00000423698 ZKSCAN8Q15776 578 aaPredicted RBP13.02□□□□□ -0.32
ERCC1-204ENST00000423698 PRR16Q569H4 304 aa13.02□□□□□ -0.32
ERCC1-204ENST00000423698 HERC4Q5GLZ8 1057 aaPredicted RBP13.02□□□□□ -0.32
ERCC1-204ENST00000423698 MAEAQ7L5Y9 396 aa13.02□□□□□ -0.32
ERCC1-204ENST00000423698 KSR1Q8IVT5 923 aa13.02□□□□□ -0.32
ERCC1-204ENST00000423698 FNBP4Q8N3X1 1017 aaPredicted RBP13.02□□□□□ -0.32
ERCC1-204ENST00000423698 ZNF507Q8TCN5 953 aa13.02□□□□□ -0.32
ERCC1-204ENST00000423698 BCAS4Q8TDM0 211 aa13.02□□□□□ -0.32
ERCC1-204ENST00000423698 SH2D3AQ9BRG2 576 aa13.02□□□□□ -0.32
ERCC1-204ENST00000423698 PSTPIP2Q9H939 334 aa13.02□□□□□ -0.32
ERCC1-204ENST00000423698 SERPINB13Q9UIV8 391 aa13.02□□□□□ -0.32
ERCC1-204ENST00000423698 IRS2Q9Y4H2 1338 aa13.02□□□□□ -0.32
ERCC1-204ENST00000423698 CCDC189A1A4V9 331 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 LRRC10BA6NIK2 292 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 DNM2P50570 870 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 CEP112Q8N8E3 955 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 FAM71BQ8TC56 605 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 SGSM3Q96HU1 749 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.33
ERCC1-204ENST00000423698 FAM107BQ9H098 131 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 ZNF287Q9HBT7 754 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 SAR1BQ9Y6B6 198 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 SNED1Q8TER0 1413 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 ESYT3A0FGR9 886 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 ACTN1P12814 892 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 PSMC6P62333 389 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 SPA17Q15506 151 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 TCERG1LQ5VWI1 586 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 PSMD1Q99460 953 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms